KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130089554
Entry
130089554         CDS       T09701                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130089554 (kdm4c)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130089554 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130089554 (kdm4c)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130089554 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 Tudor_3 PHD Tudor_5 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 130089554
NCBI-ProteinID: XP_056112908
LinkDB
Position
Unknown
AA seq 1501 aa
MAGVGESALANPACKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRN
YDDIDDFVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYDDLE
RKYWKNLTFVSPIYGADVSGTLYDEDIEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASLRWIN
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQSWTQGKDSCSLDHTLATPSTTPELQSWL
QRRRRKAPSTTSLHYPRTCSKRLKTVDTAPMKGGSRRSRGEGLTSKDKEEEDPVKHQKES
QFPTELKGLTGPCRQMCVVKVTRVESELLAHSTSQVKDASPERLSTSPLTFTSSQSNPDP
GHASAQASVNLDEGRVSTNTVSTAKPGPEPTSESDITVYVTLDSERTADIPNQTDCEFVS
AISAPSVPVTHSQRRCSTGAAVLFSESVSQQAKIETEETVADILTESSIDYSISALYKEQ
SSIRLHSTLQDSETLENRTNFEIQTAPFCEMPLLMPELTEERVNPHSLAPEMPSLTLAVR
PDTANHRPHSPSSTAPVLHLEKSHSPPVITDVGTCSGKACPNWPVVPQEGVSQPFNNSIS
DTFIAKPASPSLVSQWEPTEESKQEGHKHTCPSTDQNTQHASISQFKITTHSILQRSTVA
DMDYIDARNSNNSVDGGDKQTSMSLEEQSSSLTSSHGPFVESKPFTIWKNLSSQNPAVLI
ESLQPELVMGLTTGVNSLTEYSHDSLPYTMWSESGCQQEKFPDSPNSSPCTQTWTNLEPI
PMQCSGADVALNTPIDLKQQNVEMVPAVACMLGEQTGSQETQEEEFKGQEYYEGVKSEHD
GSVSDSDSCESGDKGVDSSSESSEENATSDPENVETGLEPGEVCTYHMQTVKKTTKSWRH
PFRKPTARAVPSAVKQQAASDDETVEECETKEEEPETEEWAKPLVHLWQQRKAHLQYERE
YNTAAAQTAPHCAVCTLFMPYYQPENLEERRHDVLMNPATESQGSCSQVAGLRSRPLIPE
ICFTYQEGPCPSNTLLEEDGSSPLVGCNSCCVQVHASCYGVSIHDVGPVWTCDRCVSGDL
AAGCCLCNLRGGALKRTSDDRWAHVMCAVGLPEVKFIDVVKRAPIDISAIPVQRYKLKCI
YCRNRIQKLSGACIQCSCGRCPTSFHVTCAHAAGVPMEPDDWPYVVFITCHRHQSRSSSA
KLKVSRSELEVGQTVISKHKNLRYYSSRVTQVTAQTFYEVMFDDGSFSNDTFPEDIVSRD
CTQLGPPEVGEAVQVKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTLDEDL
PKKVKGRLSTASSMRFQDAFFTTQGERKRRRTPNSRFQTDYIAHISPRTFARISETHSKA
N
NT seq 4506 nt   +upstreamnt  +downstreamnt
atggcaggtgttggggaaagtgccctggctaaccctgcctgtaagatcatgaccttcaga
cctaccatggaggagtttaaggacttcaaccaatacctggtgtatatggagtctcaggga
gcacatcgtgctggcctggccaaggtgattccacccaagggctggaagccacgtcgcaat
tacgatgatattgatgattttgtcatccaagcacctattcagcaaatggtagctggccaa
tcaggactcttcacccagtacaacatccagaagaaaccactcactgtgcaagaattccgt
agactggccaacagtgacatgtactgcacacctcgctacctgaactatgatgacctggag
aggaagtactggaagaatctcacatttgtctcgcccatctatggtgctgatgtgagcggc
acgctctatgatgaggacattgaagaatggaacatcgggcacttgaactcaatcttggac
gtaatcgaggaggactgtggtgtgtccattcagggagtaaacacaccttatctgtacttt
ggcatgtggaagaccagcttctcctggcacacggaggacatggacctctacagcattaac
tacctgcactttggcgagcccaaatcctggtatgccattcctccagaacacgggaagaga
ttggagcgtcttgctataggtttctttcctaacagctttaaaagctgtgaggcgttcctg
agacacaagatgacactgatatccccctctgtactaaagaaatacagcataccatttgat
aagataacacaggaagcaggggagtttatgatcacatttccctatggttaccacgctggc
ttcaaccacggcttcaactgtgctgaatccaccaattttgccagtctccggtggattaat
tatggaaaagttgctacgcagtgtacatgcagtaaggacatggtgaagatctccatggat
ccgtttgtcagacgattccagccggatcgctatcagtcttggacacaaggcaaagactca
tgctcattggatcacaccctggcaacacccagcaccacaccagagctgcagagctggctt
cagagacgtcgcaggaaagcaccctccaccacaagtctccattatccacgcacatgctcc
aaacgattgaagactgtggacaccgcaccaatgaagggaggaagtcggaggagtagaggg
gaaggtttaacatcaaaagacaaggaagaggaagacccagtgaaacaccaaaaagaatcg
cagttcccaactgaattaaaagggctcactggtccatgtcgacaaatgtgtgttgttaaa
gtaacaagagtggagagtgagttgctggcccactctacctcacaagtcaaagatgcttca
cctgaacgactctcgacttctccactcaccttcacatccagtcagagtaaccctgatcca
ggtcacgcaagcgcccaggcgtctgtaaatttggatgaaggtcgagtatccacaaacacc
gtctccaccgcaaagcctgggcctgaaccaacctcagagagtgacatcactgtgtatgtg
accctggactcagaaagaactgctgacattcctaatcaaacagactgtgaatttgtctcg
gcaataagtgcaccttctgttcctgtgacccattcacagagacgttgctccactggtgct
gcggttttattttcggaaagtgtttcccaacaggctaaaattgaaacggaagagacggtc
gccgatatcttgactgagagcagcatcgattacagcatatcagcactttacaaggagcaa
agctcgatccgtctacactctactcttcaggattcagaaaccttggagaacagaacaaac
tttgaaatccagacggctcctttttgtgaaatgcctcttctaatgcctgagctcacagaa
gagagagtcaatcctcactctctcgcacctgaaatgccctcgctgactctcgctgtacga
cccgacaccgcaaatcaccgacctcacagtccgagcagtactgcacctgttctccatctg
gaaaaatcacactcacctcctgttataacagatgtggggacttgttctggaaaagcttgt
cccaattggccagttgtaccccaagaaggtgtgagccaaccgttcaataactcgatctca
gacacctttatagcaaaaccagcatctccttctttggtgtcacagtgggagccaacagag
gagtccaaacaggaaggacataaacacacatgcccatccacagaccagaacactcaacat
gcgtcaatttcgcagtttaaaatcactactcacagtattttacaacgttctacagtagca
gacatggattatatagatgcccgcaactctaataactcagtagatggaggggacaaacaa
acttctatgtctcttgaagagcagtccagctctctcacatcctcccatggcccctttgtg
gagtccaaacccttcaccatttggaaaaacctcagctcccagaatcctgcagtgctaatt
gagagcttgcagcccgagttggtaatgggtcttaccacaggtgtaaacagtctcacagaa
tattcccatgactctctgccctacaccatgtggtctgaatcagggtgccaacaagaaaag
ttcccagattctccgaactcttcgccatgcacccagacctggaccaacctggagcccatt
cccatgcagtgctctggtgcagacgttgctttaaacacccccatagatctcaagcagcag
aacgtcgagatggtaccagctgtagcttgtatgctcggtgagcagacaggctctcaggaa
actcaggaggaagagtttaaagggcaggagtattacgaaggtgtgaagtcagagcatgat
gggtctgtgagcgactctgattcgtgtgaatcgggagataaaggtgtggacagcagcagt
gaatccagtgaggagaatgccacgagtgaccccgagaatgtggaaacgggcctggagcca
ggggaagtctgtacatatcacatgcaaactgttaagaagactaccaagagttggcgtcac
ccgttcagaaagcccactgcaagagcagttcccagtgctgtcaaacagcaggctgccagc
gatgatgagactgtagaggagtgtgaaactaaagaagaggagccagaaactgaggaatgg
gcaaagcctttagtgcatctgtggcaacagagaaaagctcatcttcaatatgaacgagag
tacaacacagctgcagctcaaactgctcctcactgtgctgtctgcacccttttcatgcca
tactatcagcctgagaatttagaggaaagaaggcatgatgtcttgatgaatcctgccaca
gagtctcaggggtcatgttcacaggtggcaggcttgagatcgcgacctctgatccctgaa
atttgctttacataccaggagggcccatgcccttcgaacacactactggaggaggatgga
tccagtcctcttgtgggctgcaacagttgctgtgttcaagttcatgccagttgctacggt
gtttctattcatgatgtcggcccagtgtggacatgtgaccgatgtgtgagcggagacctg
gcagctggatgctgtttgtgtaacctgaggggaggtgcattaaagagaacctcagatgac
aggtgggcccatgtgatgtgtgctgtgggtctccctgaggtgaagttcatagatgtggtg
aagagagctcctattgacatcagtgccatacctgtacagagatataaactgaagtgtata
tattgccgtaacaggatacaaaagctatctggagcatgtattcagtgctcatgtggccgt
tgccccacctctttccatgtcacctgtgcacacgctgctggagtgcccatggagcctgat
gattggccatatgtggtttttatcacctgtcacagacaccagtcacggagctccagtgct
aaattgaaagttagcagaagtgaattagaagtgggccagacagtgatctccaaacacaag
aatcttcgttactacagctcacgtgttacccaggtcacggcccaaacattctatgaagtc
atgtttgatgatggctcattcagcaatgatacattccctgaagacattgtaagcagagat
tgtacccagcttggacctcctgaagtgggggaggctgttcaggtgaagtggcccgatgga
cttttttatggagccaagtaccttggctctaacacttcatatatgtaccaggtggaattt
gaagatggatcccaagtattggcgaagagagaggacatttatacactggatgaagacctg
cccaaaaaagtcaaaggtcgtttgtccacggcatccagcatgcgtttccaagatgcattc
tttaccacacaaggtgaaaggaaaaggcgacgcactccaaattctcggttccagacggat
tatatcgcccatatcagccctcgaaccttcgccaggatctcagaaacgcacagcaaagcc
aactaa

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