Rhinichthys klamathensis goyatoka (western speckled dace): 130089627
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Entry
130089627 CDS
T09701
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130089627 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130089627 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130089627 (pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130089627
NCBI-ProteinID:
XP_056113015
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MPVRVVLQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCIGDMILAIDGESTEGM
THLEAQNKIKACLEEMVLSIDRSETKMWSPLVTEEGKPNPYKMNLANTDTQDVKQIGSAH
NRSAMPFNSGSPRVVTNLYNNPAGLYSSENIKSFNSAVDDVQTSAVSNEASRNSDPCKPG
QPKPALPVDSEVYKMLQDNQESNEPPRQSASFKVLQEILETGDVDKPSGFRSVKAPTPKI
GASVGNPERLSLCDKCGSGIVGMIVKVRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccgggttgttttacaaggccctggaccgtggggattccgtctggtcggaggg
aaagatttcgagcagcctcttacaatctcgagggtgaccccaggaagtaaagcggctcag
gctgacctttgcattggggacatgatcctggccatagatggagagtcaacagagggcatg
actcacctggaagcacagaataaaatcaaagcctgccttgaggaaatggtactttccatt
gacagatcagagacaaaaatgtggtccccactggtcactgaagaaggaaagcccaatcca
tacaagatgaatctggcaaacacagatacacaggacgtaaaacaaataggctctgctcat
aacaggagtgctatgccatttaattctggcagtcccagggtggtcaccaacctttacaat
aaccccgctggcctgtattcctctgagaacattaagagtttcaacagcgcagtggatgat
gtccagacttctgctgtctccaatgaagccagtaggaactcagatccctgtaaacctggc
cagccaaagcctgcattacctgtagactcagaggtgtacaaaatgctgcaggacaatcaa
gaatccaatgagcctcctcgccagtctgcctcttttaaagttctgcaggagatcctggaa
actggtgatgtagataaaccctctggcttcagaagtgtcaaggcccccaccccaaaaatt
ggagcctcagttgggaatcctgaaaggctctcactatgtgacaaatgcggttcagggatt
gtaggaatgattgtcaaagttcgagataagtttcgccacccagagtgctacgtttgcaca
gactgcgggatcaatcttaagcagaaaggacacttttttgttgaggacaagatttactgc
gagaaacacgcacgcgaacgcgtcactcctccagagggttatgacgttgtcacggttttt
ccaaagtag
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