Rhinichthys klamathensis goyatoka (western speckled dace): 130089695
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Entry
130089695 CDS
T09701
Name
(RefSeq) sorbin and SH3 domain-containing protein 1 isoform X1
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04517
IgSF CAM signaling
rkg04520
Adherens junction
rkg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130089695
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130089695
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130089695
03320 PPAR signaling pathway
130089695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
130089695
NCBI-ProteinID:
XP_056113145
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MKSSPDLMPTELDPTRVCKGKGAVTLRATLVHIDDEDGTGQEELSVNSAKSGWLGAVNGD
ATETSLPERSVNNTGADLNSTQVNETPTKVDSPVSESQSQLTSCLDHPSAITSSAKVSSS
YPLISSVNPTIVLLQHSREAVAEQGSGPNRSPAVSQNRSFSESPADMEGKTMRLSEYSAV
PVPRVPVRNTELSKDWYRNMFKQIHKIPETVEENPYRPTYIFPESNDRPLRARDDRPAHG
GEDVRPVPRSKSAVDMGSSRGQLPVPTRTSSLKPQRNEWEPPDKKVDTRKYRAEPKSIFE
YEPGKSSVLKQERKTQDVSPEDVDLVNEPWYRFFSEMDFGKVSAPSFSPLETSSDLQQYS
TCKSDDSEAEKDSLSASGQAAPECDRHTYKSVLEGGDIPLQGLRALNKRNPSTSSKVDYK
GGNGCMISPCSSVNTHSVLVTNALASQYKTKKSLSATKACIPQILPSKFKPKLSPSTDES
LERRTEQTQQRPKAHSCEDLHPEACGSQNGDTQNADHRLNSACKGNGLPESRNLHKNGPV
VGSVRSTAEFSALYRNMHNIQRPSSLGSSPNGSVRCLASFFEKPGGDISLDRTEFIPRDA
VTFRVMEFERIIQRSNCAPTRSASMPILPRSPSPSHSPAPACFLQTALSAETLVMPEPAH
TEDCSTMNTEAQTPKEEASVSDECLNISRIDLPLENEGKSEEKNSCIHDAAKETPSSCTS
EPTGNHHHDHFPFHTKQSKCKGSCPASYTRFTTILRHERQQANTLQEKRCAPPRNLLLMG
PAPFSLRRSLHSQQAKKTCALSAMKPVAGDLFLARPKPVIPQRLSSLEVLERLSNGESSP
CEGCNSDDHMDVEGSEASKDHSEDSDSSHPLGHGDHGENPDETVRKRYGDKEKILEEQRR
LKREQEEADTAARRHAGLVVTHQQFITNDRFGDLLVINEKEKRKTIERTPALARFDFRAE
SLKELPFQKGDIVYIYRQVDQNWFEGEHHGRVGIFPRSYVELLPPTEKAQPQKSAPVQVL
EYGEAMARFNFTGDTVVEMSFRKGERITLIRRVDENWYEGKVSGTNRQGIFPVTYIEVHK
RPRVKNGVDYPDPPLSQSPHRSTNASPQPIRNRLTTSPLPLPRSPRRSISPEVHAISNEW
ISLTVGGASSSPPAAPTPPLPPLPSTCYRLGEYLPPSMSASPVPPISGSPYCISPMASPS
SSPLPPPYPPRPCSATPFLTFTPPQSEDFLLSPPSPRLSRSLSPCGGAGLEGWLTRGNRL
DQEFQEGDGSEIDRAGSLRKAPYSRNYSPAEPLRNDVEYYGRSSRSPVMLFDIQDNNMNA
NSFTEAVCNEIMNIAETSVRYCSTLSRPIDSAHRLLPPPSKHSLIISQQPLSQSSSPEPG
RMSCGIFQALYNYMPQNEDELELQEGDLVNVMEKCDDGWFVGTSKRTKQFGTFPGNYVKA
VNL
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttcacctgatctcatgcctactgagttggaccctacccgcgtttgtaagggg
aaaggtgctgttactttgagggccacgctagtgcacatcgatgatgaggacggcacgggc
caagaagagctatccgtgaactctgccaaaagtggatggcttggtgcggtcaatggagat
gccacagaaacaagtctgcctgagagaagtgtaaacaacaccggagctgatttaaattca
actcaagtcaatgagacaccaacaaaggtggactcgcctgtaagtgagagtcagtctcag
ctcacatcctgccttgatcatccgagtgctattacctcatcagccaaagtgtcctcttca
tatcccctcatcagcagtgtgaacccaacaatcgtcttgctgcagcacagcagagaagct
gttgcggagcagggcagtggccctaatcggagccctgctgtcagccagaatagatctttc
tctgagagtccagcagacatggaaggaaagacaatgagactgtctgaatattcagctgtc
ccggtacccagagtcccagtacggaacacagagctatcaaaggactggtacagaaacatg
ttcaaacagattcacaaaatcccagagactgtcgaagaaaatccatatcgtcccacctac
atatttccagagagcaatgacaggccactgagagccagagatgacaggccggcacatggt
ggtgaggatgtgcggccagtccctcgctccaagagtgcagtagacatggggagctcaaga
ggacagctgcctgtgccaacacgcacatcttccctaaaacctcagaggaatgagtgggag
ccccctgacaagaaagtagacaccaggaagtaccgcgctgagcccaagagcatatttgag
tacgagccaggaaagtcttcagtgctgaagcaggagagaaagactcaggacgtaagtcca
gaagatgtagatttagtgaatgagccttggtataggttcttttctgagatggattttggc
aaagtgagtgccccctctttcagcccattggaaacatcttccgacctccagcaatactcg
acctgtaaatcagacgacagtgaagcagagaaggacagcttgtctgccagcgggcaggca
gctccagaatgtgatcgacacacttacaagagtgtcctggagggcggcgacatcccactg
cagggcctgagagcgcttaacaagcgcaaccccagcacttcctctaaagtggattataaa
ggtgggaatggctgtatgatttcaccctgctcttctgtaaatactcactcagttcttgtc
actaatgcactagcttctcaatacaagactaaaaagtccttgtcagccaccaaagcctgc
atccctcaaatccttccctccaagtttaagcccaagttatcgccctctaccgatgagagc
ctggaaagacggaccgagcagacacaacagcggcccaaagcgcacagctgcgaggatctg
catccggaggcctgtggctcacagaatggagatacgcagaatgccgatcacaggttaaat
tcagcttgcaagggcaatggtttacctgagagcaggaaccttcataaaaatggacctgtt
gtgggatctgtgaggagcacagctgagttctctgccctctatcgaaacatgcataacatt
cagaggccgagctccttgggctctagccccaacggtagtgtccgctgcctggcttccttt
ttcgagaagccggggggtgacatttccctggataggactgagttcatcccccgggatgcc
gtcacttttcgggtgatggagtttgagcgtatcattcagcgttcgaactgtgcgcccact
cgctccgcctcaatgcccattctccctcgtagcccaagtccttcccacagccccgcgccg
gcctgctttctccagaccgctctgtcagctgagactctagtcatgccagagcctgcacat
actgaggactgttcaaccatgaatacagaggcccaaacacccaaagaggaagcttctgtg
tcagacgagtgcctgaacatctcaagaattgacttacctttggaaaatgagggcaaatcg
gaggaaaaaaacagttgcattcatgatgctgccaaagagacgccctccagctgtacttca
gaacccacaggtaaccatcaccatgatcacttccccttccacaccaaacaaagcaagtgt
aaaggctcctgcccggcttcctacacacgtttcaccacaatcctcaggcacgagcggcaa
caggccaacaccctgcaggagaagagatgtgctcccccaagaaacttgcttctgatggga
ccagcccctttctccttacggaggtccttacacagtcaacaggccaaaaagacttgtgct
ctctccgccatgaagcccgtggccggagacctcttcttggccaggccgaagcctgtgatt
ccccaacgcctgtcctctttggaggtgctggagaggctcagtaacggagagagctctccc
tgtgaggggtgcaactcggatgaccacatggatgtggagggctcagaagccagtaaagat
cactctgaagactccgattcctcacatccattaggccatggggatcatggagagaaccca
gatgagactgtccggaaacgctatggagataaagagaaaattctggaagagcagagacgg
ttaaagcgagagcaggaagaggcagatacagccgctcggagacacgctgggctggttgtg
actcatcagcagttcattactaatgaccgcttcggcgacctgctggttattaatgagaaa
gagaagagaaaaaccatagagagaactcctgctttggcgcgatttgacttcagagcagaa
agtttaaaggaactaccatttcaaaagggagatattgtatacatctaccggcaagttgat
cagaactggtttgagggagaacatcatggaagagttgggatctttccacgcagctacgtt
gagctcttgccgccaacagaaaaggctcagccccaaaaaagtgctccggtccaggtgttg
gaatacggagaggctatggctcgatttaatttcactggtgacactgttgttgaaatgtct
ttcagaaagggggagcgaataacactaattcgcagagtagatgagaactggtatgaaggc
aaagtttctggcactaaccggcagggcatcttcccggtcacctacatagaggtgcacaaa
agaccccgagtgaaaaatggagtggactatcctgatccccctctcagccagtcacctcat
cggagcacaaatgcctctccacagcccattcgtaatcggctcaccacctcccctcttcct
ctgccccggtctccccgccgctcgatctcccccgaggtccatgccatctccaacgagtgg
atttctctcactgtgggcggagccagcagcagccccccagccgcccccactccacccctc
ccccctctgccaagcacttgctaccgcttgggcgaatatctgcccccctccatgtcagcc
agtcctgtgcctcccatcagcggcagcccctactgcatctcccccatggcctctccttcc
tcgtctcctttacccccgccctatccaccccggccctgctcggccaccccgttcctcacc
ttcactccacctcaaagcgaggacttccttctttctccaccatctccccgcctctcccgc
agcctgagtccctgtgggggtgctgggcttgagggttggcttactaggggcaacaggctg
gatcaggagtttcaggaaggggatgggtctgaaatagacagggctggcagcctccgcaag
gctccttacagcaggaactatagcccagcagagccattaagaaatgatgtcgaatattac
gggcgatcttcaagaagtcctgtcatgctgtttgacatccaagacaacaacatgaatgcc
aattcatttacggaggcagtgtgtaatgagatcatgaatattgcagagacctcagtgagg
tactgcagcactttgtcacgtcccatagactccgcccaccgactcctgcctcctcccagt
aaacactctctcatcatttcccagcaacccctgtcccagagcagcagtcctgagcctgga
cgcatgagctgtgggatatttcaggctctgtacaattatatgcctcagaatgaagatgag
ctggagctacaggaaggagacctggtcaatgtcatggagaaatgcgatgatggctggttt
gtgggtacatctaagaggacgaaacagttcggcacgttcccaggaaattatgtgaaagct
gttaatttgtga
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integrated database retrieval system
