Rhinichthys klamathensis goyatoka (western speckled dace): 130089799
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Entry
130089799 CDS
T09701
Symbol
f11r.1
Name
(RefSeq) F11 receptor, tandem duplicate 1 isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04517
IgSF CAM signaling
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130089799 (f11r.1)
04517 IgSF CAM signaling
130089799 (f11r.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130089799 (f11r.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130089799 (f11r.1)
04090 CD molecules [BR:
rkg04090
]
130089799 (f11r.1)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
CTX family
130089799 (f11r.1)
CD molecules [BR:
rkg04090
]
Proteins
130089799 (f11r.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
Ig_C17orf99
V-set_CD47
C2-set_2
Motif
Other DBs
NCBI-GeneID:
130089799
NCBI-ProteinID:
XP_056113309
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MLTFVFVCLSISVSGLHADFTVTVANPSVKVKENEGADLKCSYTADFGATPRIEWKFKDL
KGSQSLIYFDDKPTAQYASRVTQYPGGLRFNKVTRADTGDYDCEVSGNSGYGENTVKLTV
LVPPSKPVSRIPSSVTTGSNALLSCFDNDGSPPPTYKWYKDNTPLPDDPSKFPSFKNLTY
KMNAFNGNLEFPSVSKLDIGSYFCEASNGEGAPQRGNAVQMDVRDLNVGGIVAGVIVALL
AVGLLLFALWFASKKGYLPSKFLLRVCLEE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccttcgtctttgtgtgcctctctatctcagtctcaggcctacatgctgatttt
acggttactgttgctaatccctcagtaaaagtgaaggagaatgagggagctgacttgaaa
tgttcctacaccgctgactttggagcaacacccagaatagaatggaagttcaaggatctc
aagggctctcagtcattaatttactttgatgataagccaactgctcagtatgcaagccgt
gtcactcagtatcctggaggactgagatttaacaaggtgacgcgagcagacactggagac
tatgactgtgaggtgtctggaaatagtggatatggagagaacacagtcaaactcactgtc
cttgtgcctccttctaagcccgtatctagaattccttcatcagtcacaacaggcagtaac
gcacttctttcctgcttcgacaatgatggctcccccccacccacctataagtggtacaaa
gacaacactcccctccctgacgatcccagcaagttcccctcttttaaaaacctcacctac
aagatgaacgctttcaatggtaacctggagttcccgagtgtgtctaagctggatatcggt
tcatatttctgtgaggcctctaatggagaaggtgcccctcagcgtggtaatgcagtgcag
atggatgtccgtgatctaaatgttggtggcattgttgctggggtcatcgtggctttgctg
gcagtagggttgctcctctttgctctctggtttgccagtaaaaagggatatctaccaagt
aagttcttactgcgtgtgtgtcttgaggaataa
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