Rhinichthys klamathensis goyatoka (western speckled dace): 130089804
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Entry
130089804 CDS
T09701
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130089804 (trim71)
04121 Ubiquitin system [BR:
rkg04121
]
130089804 (trim71)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130089804 (trim71)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130089804 (trim71)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130089804 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
DUF5711
zf-RING_2
Invasin_D3
Ig_GEX2_N
DUF4094
BBP1_C
Motif
Other DBs
NCBI-GeneID:
130089804
NCBI-ProteinID:
XP_056113317
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSTSSTRRL
HVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVVV
SAEEQGKNGRSSSVVHHGGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAHQ
RVRLTKDHFIEGLMESLHLANRTINSNTPVNISQSFHNSFSMLNVFQERVEFCQQHDNAV
LRFFCDSCSVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAIQLSIEK
AQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLH
QNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCFLQPQEDDRIMFTPPD
QALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDSVS
VVLMNPDGNLSSADVSDHQDGTYTVGYLPKSEGEHLLSVLVCNQHIEGSPFKVMVKSGRS
YGGVGLPIATFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHRFGT
LGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFSFDGQFLVKFGEKGTKNGQFNYPWD
VAVNSEGKILVSDTRNHRVQLFGPDGSFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTD
FNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNG
NFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVAVDFGNNRILVF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattctgtggtcctctgcacaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcttcctcacagacctccaactcatctacctcatccaccaggagactg
cacgttctgccctgtctgcacgccttctgcaggcaatgcctggagggccaccggagcccc
ggtgaccctctgaagctcagatgccccacatgcgaccaaaaagtgtctttgtcggaatca
ggcgtggacgcgctgccctcctccaactttctgttcagcaaccttctggatgtggtggtc
tctgctgaggaacagggcaagaacgggcggtcttcatcggtggtccatcacggtggtctt
ctgagaccccagcacctctcggacccccagtgcagctcttgtgatgaggggaaccccgct
acctctcactgcctggactgccaggagtacctgtgcgataactgcgtacgggcccaccag
agggtccgactcaccaaagaccacttcatcgaggggctgatggagagcttacacctggct
aaccgcaccatcaactccaacacccccgtcaacatctcccagtccttccataacagcttc
tccatgctgaatgtgttccaggagagggtggagttctgccagcaacatgataacgcggtg
ctgcgctttttctgcgacagctgctccgtgccgatctgtagggagtgcagcttgggcaga
cacgcaggtcacagtttcacctaccttcaggaagcactgcaggactccagagcgctgaca
atccagctgctcgcagacgcacagcagggtagacaggccatacagctgagcatcgagaaa
gcccaagccattgctgaacaggtggagctgaaggctaaggttgtgcagtcagaagtgaaa
acgatcactctacgtcataagaaagctctggaggaacgcgagtgtgagctgctctggaag
gtggaaaagatccgccaggtgaaggcaaaatcactttacctgcaggttgagaaactacac
cagaatctcaccaagctggatagtactatcgccacagtgacgcaggttttagaagaaggc
cgtagcatagatgtcctgctagcacgcgagcacatgttaaatcagctacaggagcttaaa
tctctccgctgcttcctacagccccaagaagacgatcgcatcatgttcacccctccagac
caggctcttctgattgccatcaagtccatgggcctcatcagcagtggagcctttgccaca
gcttccaaagctcacggtgaaggcctcaagagagcactgcaaggaaagctagcttccttt
actgtcgtagggtatgatcatgatggtgaacctcggttgtccggtggtgacagcgtctca
gttgtgcttatgaatccggatggtaatctgtccagcgcagatgtttctgatcaccaagat
ggaacgtacacagtcggctatttgcccaagagcgagggtgagcatttgctctcggtgctt
gtatgcaatcagcacattgagggaagtccgttcaaagtgatggtcaagtccggtcgcagt
tacggcggtgttggcttgcccattgcaacctttggaggagagggcgatggggacgggcaa
ctgtgtcggccttggggcatctgcgtggataaggagggctacgtggtggttgctgaccga
agcaacaaccgcgtgcagatcttcaagccttgtggcacgttccaccacaggtttggcact
ttgggctctcgaccgggccagtttgaccgcccggctggggtcgcctgtgacagccagagg
agaatcattgtagcagataaggacaatcaccgcatccagattttctcattcgatggccag
tttcttgtcaaatttggcgagaagggaaccaaaaatgggcaattcaactacccatgggat
gttgccgtcaactctgagggaaagatcctggtttcggatacacgcaaccaccgcgtgcaa
ctctttgggcctgacgggtctttcctcaacaaatacggattcgaaggtgccctctggaaa
cattttgactcgcctcgcggtgtagcttttaatcaggaaggtcacctcgtcgtgaccgac
ttcaacaatcatcggctgcttgtcatcaggcccgattgccagtcagcacgcttccttggg
tccgagggaaccggaaatggccagttcttgcgcccacaaggcgtagccgtggaccaggag
gatcgtattatcgtggctgactcccgcaaccatcgcattcaggtgttcgaacccaatggc
aactttttatgcaagtttgggactcaagggagcggcttcggccaaatggatcgcccctct
ggtatagcggttactcctgatggaatgattgtggctgtggactttggaaacaaccgaatc
ctcgtgttctga
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integrated database retrieval system
