Rhinichthys klamathensis goyatoka (western speckled dace): 130089807
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Entry
130089807 CDS
T09701
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130089807 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130089807 (ddx31)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130089807 (ddx31)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130089807 (ddx31)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
Pre-60S particles
Helicases
130089807 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
130089807
NCBI-ProteinID:
XP_056113316
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAEDMLMLNISSDPVTFHRKTDRSHLTSAEKWAQKKLESKRKAVFEPQESSASKQRKINQ
TGQQHTHKQKLQTPKSPSRRSNRYTEENGDHSEIIAAKSPSKVKTFPKKAPEEHGDHGRP
FIKTSSLFRNNPEIPDVLSPAVNLVKEKVFTSNTFEELNLHPHLVATLHKVLNVTSMTSV
QKQTIPVLISGKDAVVRSQTGSGKTLAYGIPVVQFLQAMQPKVKRSDGPLAVVIVPTREL
ALQSFQMFQKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINVLISTPGRLVDHIKNTLSI
AFSAVHWLILDEADRTLDLGFEKDLTLILNALNATGLARQNVLLSATLTEGLSRLASISM
KEPVSIHVSEGSGETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILTK
CKFEQRQKLIVFISSCEAVEFLLTLFTAVLCENPSTTSTKRTSYLNFYRLHGSMRQEERT
EMFQEFSQCKTGILLCTDVAARGLDLPQVTWIIQYNPPVSAAEYVHRVGRTARIGAQGSS
LLFLTPSETAFVDVLANHNISLSEMKMVDILATLIKDERFKGRGKWDSKRSAAAFEQEVR
ERATVLQTDFENYVHANNESLQTAKSALQSFLRAYTTYPSSLKHVFHIRNLHLGHAAKSF
GLRDAPQGLGSSITTNPTNSKDSKKGKDKAKRPPKKLTSKERVSNLMRSEYLSGIEGESK
SMKKRKKKKGQAEEEDSA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggacatgctaatgctcaacatctcctcagatcccgtaacgtttcacagaaag
acagaccgaagtcatctgacatcagcagagaaatgggcacagaaaaagctagaatcaaag
aggaaggctgtctttgagccccaagagagcagcgcctccaaacagaggaagattaatcaa
actggtcaacagcacacacacaagcaaaagctgcaaacccccaaaagcccctctcggagg
agtaatagatacacagaggagaacggagaccatagtgaaatcattgcagcaaagtcgcca
tcaaaggtgaaaacatttccaaagaaagctcccgaagagcatggagaccatggcagacca
tttatcaagacatcgtctctcttcagaaacaacccagagatccctgatgtcctcagtcct
gctgtaaatctagtaaaggagaaagtcttcaccagcaacacatttgaagaactaaatcta
catcctcatctggtggcaacgctccataaggtgttgaatgtgaccagtatgacgagtgtc
cagaaacaaaccataccagtgctgatatctggtaaagatgcagtcgtgcgctcacagact
ggatcaggaaaaacattggcatatggaattccagtggttcagttcttacaagcgatgcaa
cctaaagtgaagagatcagatgggcctttagctgttgtgattgttccaaccagagagctt
gccctgcagagctttcagatgtttcagaagcttctaaaacctttcacctggatcgtgcca
ggagttctgatgggaggagaaaaaaggaaagcagaaaaagccagactgaggaagggcatt
aatgttctgatctcgaccccaggccgactggtggaccacatcaagaacactcttagtata
gctttcagtgctgtgcactggctcattctggatgaagccgacaggactctggatttgggc
tttgagaaagatctgactctgattctgaatgctctgaacgccactggacttgccagacag
aatgtgctgctttcagccacactcaccgagggactgtcccgattagccagtatcagtatg
aaggagcctgtgagtatccatgtgtcagaggggagtggggagacagttgaagcgtgtccc
caggcggcccctcaggctctgtcagacagttacgcggttcctgagagactgcagcagcat
gtggtggtggtgcccagcaaactccacctggtctgcttggctgcctttattctgaccaaa
tgcaagtttgagcagcggcagaagctgatcgttttcatatccagctgtgaggctgtagag
ttcctgctcactctcttcactgcagtcctctgtgagaatcccagcaccacatcaaccaaa
cgtacctcatacctcaacttctacaggctccacggcagcatgagacaggaggaacgcact
gagatgttccaggagttctctcagtgtaaaactggaattttactgtgtacggatgtggct
gcacgtggattggatctgcctcaggttacgtggattatacagtacaaccctcccgtttcc
gctgcggagtatgttcatcgcgtgggccggacggcacgaattggagctcagggcagcagc
ctgctgttcctcaccccctctgagactgcttttgtggatgtgctggccaatcacaacatc
agtttgtcagagatgaagatggtggacatcttggccactttgataaaggatgagcgcttc
aaaggcagagggaaatgggacagtaagagatcagccgctgcttttgagcaggaggtgcga
gagagagccaccgttttacagactgactttgagaattatgttcatgccaataatgagtct
ctgcaaactgcgaagagcgcactgcagtctttcctaagagcatacaccacatacccctcc
agtctgaaacacgtcttccacatccgcaacctgcacctgggccacgccgctaagagcttt
ggcctgagggacgcaccccaggggctgggcagctccataaccactaatcctaccaacagc
aaagactccaagaagggcaaagacaaagcaaagaggcctcccaagaaactcacatcaaag
gagcgggtgtcaaacctaatgcgctcagaatatctcagtgggatagagggagaatccaag
tctatgaagaagaggaaaaagaagaaaggtcaagcagaggaagaggactctgcatga
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integrated database retrieval system
