Rhinichthys klamathensis goyatoka (western speckled dace): 130089946
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Entry
130089946 CDS
T09701
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130089946 (ppfibp1a)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130089946 (ppfibp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
SAM_PNT
DUF7691
LMBR1
Motif
Other DBs
NCBI-GeneID:
130089946
NCBI-ProteinID:
XP_056113544
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MMCDASEMLAAALEQMDGIIAGSKAMNYTNGLFDCQSPTSPFLGSLRVLHLLEDLRAALD
LMDPEEKQSLRSQVSETTAEGLMEWLQGRLTNGHGSAAGDLVYQERLSRLESDKECLVLQ
VSVLTDQVEVQGEKIRDLDSSLEEHRMKLSATEELLQQELLSRSALEAEKLEMLTEISSL
KLKLAAAEGDCRESEGLYQDVKDMHFKLTSMENERQEHERSLNSTKVELKSLQKQLEEKE
QALRRLQDQAFPENPNTEQSQSREKEMEVQRMRSAVESLKAANEEKDLKIKELHQSLIRY
NRVQDMVMSLQISKDKPREEDTRECDTETVFTGGTEETDEPQLIPCSELLPEVHLIGVTT
LGPTDSVSALQQPESSRLTSNNEDQASKNGGSPSVSPTQPSSGGSESFGSKKTRSSFGRG
FFKSRGSKTTSTPNLVEGERKGTEHLDLAGAQTQKPKALETLSPEGKKKSKGIMKFLGRM
KRSQSTSSDLDDSPESEFRRGGVRATAGPRLGWSRDLQRSNNNELDSPFSRWSKEQVCEW
LQEQGLGLYINHAQQWISSGQTLLKASPHDLEKELAIRNPLHRKKLQLALHSLGSDEDAM
GKLDYHWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDDLLGLKVGSVLHHLGIKRAI
QVLRINCYDPDCLRRRPTENNATPAEICQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGL
MVLEPRFNIETMALLLNIPPNKTLLRRHLATHFHLLIGSEAQNLKQEYLENPDYAVLTAT
AKVKPRRLSFGGFGTLRRKRQEETEEYVCPMDVQMPQSSSFHKGLCIYEGSLDQLEQLED
SEGTVRQIGAFSEGINNLTSMLKEDESFREASSRSPETSTYDED
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgatgccagtgaaatgttggcagctgctctggagcagatggatggtatcatt
gcaggttctaaggccatgaactacacaaacggcctgtttgattgtcagtcaccaacttcg
ccattcctgggcagccttcgggtgctgcatctcctggaggacctgagggctgctttggac
cttatggatccagaggaaaagcagagtctgcgcagtcaggtttccgaaaccacagctgag
ggtctgatggagtggctgcaaggacgactgaccaatggccatggatctgcagcaggggat
ttggtctaccaggagcgactctctcgcttggaaagcgacaaagaatgtctagtgctccag
gtaagtgttctgactgaccaggtggaagttcaaggagaaaaaataagggacctagactcg
agccttgaggaacaccgcatgaaactgagtgctacagaagagttattacagcaggagctg
cttagtaggagtgctttagaggcggaaaaattggaaatgctgaccgagatatcgagtctg
aaactaaagctagccgctgcagaaggggattgcagagaaagtgagggtctttatcaggat
gtgaaagacatgcattttaagttgacttcaatggagaacgagagacaagaacatgagaga
agcctcaactctaccaaagtggagctgaaatcactacaaaagcagttggaagagaaagag
caggcacttagaagacttcaggaccaggccttcccagaaaacccaaacacagaacagtca
caaagcagagaaaaagaaatggaggtgcagagaatgaggagtgctgttgagtctttgaag
gcagctaatgaagagaaggatcttaagataaaagagctgcaccagtctctgatccgttac
aatagagttcaggatatggtgatgtctctgcagatatcgaaagacaaacccagggaagag
gacacaagagagtgtgacaccgagacagtcttcacaggaggcacagaggaaactgatgaa
cctcagctcattccatgttcagagctgctccctgaagtccacctcatcggagtgaccaca
ctcggacccacagacagtgtctctgcattgcagcagcctgaaagttctcgtttgacaagc
aataatgaggatcaagccagtaaaaatggaggctctccatctgtctccccgactcagccc
agctcaggggggagtgagagttttggctctaaaaaaacacgttcctcttttggacgtggc
tttttcaagagcagaggaagcaagacaaccagcacccccaatctggttgaaggagagcgc
aaggggacggagcacttggatttggcgggagcacaaactcagaagccgaaagcattagag
acactctctcctgaagggaagaagaaatcaaaggggatcatgaagtttctcggaaggatg
aagagaagccagtccacatcctctgacctggacgattctccagagtcagagtttaggaga
ggtggagtccgagctacagcgggacccaggctggggtggtcacgtgatctgcagcgaagc
aataacaacgagctggacagcccgttttcacgctggagtaaagagcaggtgtgcgagtgg
ctgcaggaacagggactgggcttgtatataaatcatgctcagcaatggatcagctctgga
cagaccttactcaaggcgtctccgcatgatttggaaaaggaactggccatcagaaatcct
ctacacagaaagaaactgcaactggctcttcattcgctgggctcagatgaagatgccatg
ggtaaactggactaccactgggtaacgcgatggctggatgacatcggcctgcctcagtat
aaatctcagtttgacgagggcagagtggacgggcgcatgcttcactatatgactgtggat
gacctgctgggtctgaaagtaggcagtgtgcttcaccatctcggtattaagagggccatc
caggtgctacgtatcaactgctacgaccctgactgtctccggcgcagaccgacagagaat
aatgccacaccagcggaaatctgtcaatggaccaatcacagagtgatggagtggcttcgt
tcagtggatctggcagagtacgcacccaacctgagaggaagcggagtccacggaggccta
atggttttagagcctcgtttcaacattgagacaatggctctgcttcttaacatcccacca
aacaaaacactgttgagacgtcaccttgcgactcacttccatctcctgatcggctcagag
gcacaaaacctgaaacaggagtatctcgaaaacccagattacgctgtcctcacagccaca
gccaaagttaagccaagacgtctgtcatttggaggtttcgggacattgaggaggaagcga
caggaggagacggaagagtatgtttgccccatggatgtgcagatgcctcagagcagcagt
tttcataaaggcctctgcatatatgagggcagcttggatcagctggagcagttggaggac
tcagagggcacagtgcgtcagatcggtgccttctcggagggaatcaacaacctgactagt
atgctaaaagaggatgaatccttcagggaagcatcctcccgttcacctgaaacaagcacc
tatgatgaagattaa
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