Rhinichthys klamathensis goyatoka (western speckled dace): 130090037
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Entry
130090037 CDS
T09701
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130090037 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130090037 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130090037 (taf2)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130090037 (taf2)
Peptidases and inhibitors [BR:
rkg01002
]
Metallo peptidases
Family M1
130090037 (taf2)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130090037 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
130090037 (taf2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130090037 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
RPN2_C
Motif
Other DBs
NCBI-GeneID:
130090037
NCBI-ProteinID:
XP_056113674
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPTVMNLNRIKLNSKQCR
IYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGNGELSIKVP
SELWKQGDEMKVMKVYIEFSLDQPKGGLHFVVPDVEGSMAERAAHVFSFGNQNSSRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTNDMRKKTYHYMLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYACFKTVFVDE
AYVQVSSYASMSIFSTNLLHSGMIIDQTPMTRRFLAYALAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFSGGKEKDNPTPHL
HFSIKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRFERDVVAQEEAISALEK
FPTPASRLALTDILEQDQCFYKVRMQACFCLAKIANSMMSTWNGPPAMKSIFTRMFCCKS
CPNIVKTNNFINFQTYFLQKTMPVAMALLRDVQNLCPREVLSFILDLIKYNDNRKNKFSD
NFYRAELIDALTNSLTPVISINNEVRTVDNLNADVRLILEEITRYLNMEKLLPSYRNTVT
VSCLRAIRMLQRNGHIPSDPSLFKAYAEYGHFVDVRVAALEAVIDYTRVDRSSSELQWLL
DLVQNDPVHYIRHEILSMLAKNPPFTKAVDSSLCNEALVDQLWKLMNSGTCHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSEQGPGGPEVTPNMTFTSTLE
EEHAVMEPALSGVAMAPQGLKRKAETPLGSSPEPGQVMQEEPSAKAPVKSREEEDIDMDT
VHDSQAFIYHHLNMLERPSTPGKEPSSVEQAILSMPGTPMPTLSKESTSAKYGDHHHHHH
HHHEHKKKKKKHKHKHKHKHKHESKDKDKDRDSHAFSNSPASGRSIRSPSLSD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaaagacaagggctttgagagcccacgaccatataaactaacccatcag
gttgtctgcattaacaacataaattttcagaggaagtctgtcattggttatgtggagctg
accatctttccaacagtgatgaacctgaaccgtattaaactgaacagcaaacagtgccgt
atctacagagtgagagtgaatgatcttgaggctccattcatttacaatgaccctacgctg
gaggtctgccatcatgaatccaagcagaggaacctgaactatttctccagtgcttacaca
gcagcggttagtgctgtggatccagatgctgggaatggggagctttccattaaagttcct
tctgagctctggaaacagggagatgagatgaaagttatgaaggtgtacattgaattctca
ttggatcaaccgaaaggagggttgcattttgtagtacctgatgtggaaggaagtatggca
gaaagagcagcccatgttttctccttcggcaaccagaattcctcacggttctggtttcca
tgtgtagactcctactctgagctgtgcacatggaagcttgagttcacagtggatgcctcc
atggtggcagtgtcctgtggggacctagtggagacagtctacaccaacgatatgcgcaag
aagacctaccactacatgctgcccatccccactgcggccccgaacatttccctggctgtg
gggcccttcgagattctggtggacccctacatgcatgaggtgactcatttttgcttgcct
cagcttctgcccctgctgaagcacaccatgtcctacctgcatgagatttttgagttctat
gaggagatcctcacctgtcgctacccatatgcttgcttcaagaccgtctttgtggacgag
gcttatgtgcaggtctcatcatatgcatcaatgagtatttttagcaccaacctccttcac
agtggtatgatcatagaccagacaccgatgaccaggcgctttctggcttatgctttggcc
cagcagttttttggttgcttcatctctaggatgtcctggtctgatgagtgggttttgaag
ggaatttcaggatacatttatggcctctacctgaagaaaacatttggagtcaatgagtat
cgtcactggattaaggaggaactggacaagatcgtggagtatgagctaaagatgggtgga
gtcctgctacatcccaccttctctggaggaaaagaaaaagacaatccaacaccccacctg
cacttttccatcaaacacccccacacattgtcctgggaatattacaagatgttccagtgc
aaagcccacctggtcatgaggctcatcgaaaaccgaattagcatggagttcatgttacag
gtgtttaacaagctcttgagtctggccagcacagcctcatcccagaaatatcagtctcac
atgtggagccagatgctggtatccacctctggattcctcaaatccatttctaatgtctca
gggaaggacatcggacccctcatcaaacaatgggtagaccagagtggagtggtaaaattc
tttggaagttttgccttcaacaggaaaagaaatgttttggaacttgagatccgtcaggac
tacacttcgtctggcacacagaaatatgtgggccctattaaagtgacagtgcaggaattg
gatgggtcatttaaccacacattgcagatagaggagaacagtctcaaacatgacattccc
tgccactccaaaagcagaaggaacaagaagaagaaaatccctctaatgaatggagaggaa
gtagacatggacttgtcagccatggatgctgactctcctctgctgtggatccgaattgat
ccagacatgtccatcctgcggaaggtagagtttgaacaggccgatttcatgtggcagtac
caactgcggtttgagagggatgtagtggcccaggaggaggctatttcagcgttggaaaaa
tttcccactcctgcgtcacgacttgctcttacggatatcctagaacaagaccagtgcttt
tataaagtccgcatgcaggcctgcttctgtcttgctaagattgctaattccatgatgagc
acctggaatgggcccccagccatgaagtctatctttacccgcatgttctgctgcaaaagc
tgcccaaatatcgtcaagaccaacaacttcattaattttcagacctacttcctgcaaaag
actatgcctgtggccatggctctgctcagagatgttcagaacctttgtcccagagaggtc
ctgagttttatactggacctcatcaagtacaatgacaaccggaagaacaagttttctgat
aatttctatcgtgctgagctgattgatgccctgacaaattcactgactcctgtcatcagc
attaataatgaggtgcgcacagtggacaacttgaatgcagatgttcgcctgatcttggag
gaaatcacacgctaccttaacatggaaaagctgctgccaagctaccgtaacaccgtaaca
gtcagttgcttacgggccattcgcatgctacagaggaatggccacatccccagtgacccc
agcctgttcaaggcctacgctgagtatggccactttgtggatgtgagggttgcagcactg
gaggctgtaatcgactatacaagagttgataggagttccagtgaactgcagtggcttctg
gatctggtacagaatgacccagtccattacataaggcatgagattctcagcatgcttgcc
aagaatccacctttcaccaaagcagtggattcttcgttatgtaacgaagctttagtggac
caactatggaagctgatgaactcaggtacctgtcatgactggcgtttgcgatgtgatgcc
gtaaatctctactacactctgtttgggctgacccgaccctcctgtctgccgttgccagag
ttgggtctcgtgctgaacctgaaggagaaaaaagctgttctcaaccccaccatcaaatct
gaacagggccctggtggcccagaggttaccccgaacatgaccttcaccagcactctggag
gaggagcatgctgtcatggagccagcattgagtggtgtggccatggccccacagggttta
aagaggaaggcagagactccgttaggttcatctccagaacctggacaagttatgcaagag
gagcccagtgctaaagcaccagtgaagagcagagaggaggaagatattgatatggacaca
gttcatgacagccaggcattcatctaccaccatctgaacatgttggagagaccttcaact
ccagggaaggaaccatcttcagttgagcaagccattctgtccatgccaggaacacccatg
cccacactgagcaaagagagcacatctgccaaatatggagatcaccaccaccaccatcat
catcatcatgagcacaagaagaagaagaaaaagcacaaacacaaacataaacacaaacac
aagcatgagagtaaggacaaagataaagacagagattctcacgcttttagtaacagccct
gccagtggccgctccattcgttctccatctctgtctgactaa
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integrated database retrieval system
