Rhinichthys klamathensis goyatoka (western speckled dace): 130090435
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Entry
130090435 CDS
T09701
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130090435 (irx2a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130090435 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
130090435
NCBI-ProteinID:
XP_056113784
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTASASGFSSPLS
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDED
EDDGDGERKDERPDKTMDNSEASAEDEGISLHVDALTDHSCSVESDGEKVTCRTGDLVCD
SGPDTKDKCDASDLDTGREERHRGPSPKPVTSPPLTGVEAPLLTHHHREDTRNSTNKTCL
DGQNQTVKPKLWSLAEIATSDPKQHQHQHLGQNCPPGVGLLTSTAPSASPAGAVYPATSI
LGRPLYYTSPFYSNYTNYGNFSPLQGQGILRYNSAGEGLLHKQSCDPLLKTNPNQTEQHF
RASNAESKKDPTEVFTVRHQSYLSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggcgctgtactcctgt
ccgctggccgccccgaggagtgaggagctggcccggtcctcgtccggttcagcgttcagc
ccgtaccccggatcagctgcgttcacagcctcggccagcggattctccagccctctgtcc
tactctacagatccagccacgggattcccgtcctacatggggtctccgtatgacgcgcac
actacggggatggcaggagccataagttatcacccgtacgggagtcccggttacccgtac
cagctgaatgatcccgcttaccggaaaaatgccacgcgggacgcgacagcgacgttaaaa
gcgtggctgcaggagcacaggaaaaacccttatcccacaaaaggagaaaagatcatgctg
gccatcatcacgaaaatgaccctcacgcaagtgtccacctggttcgctaatgccagacgg
agactcaagaaggagaacaagatgacatgggcaccgcggaataaaagtgaagatgaggat
gaagacgacggcgatggagagagaaaagatgagcgaccggataaaaccatggacaacagc
gaagcgtctgcggaggacgaagggatcagtttgcacgtcgatgccctgacagatcactcc
tgctcagtggaatcggacggagagaaggtcacgtgtaggaccggggacctggtttgtgat
tctggacctgataccaaggacaaatgcgacgcgagcgatctcgacacgggccgcgaggag
aggcatagaggcccgtcacccaagccggtgacctctccccctctgactggggtggaggcc
cctctcttgacccatcatcacagagaggacacccgaaacagcaccaacaaaacatgcctt
gacggtcaaaaccaaaccgtcaaacctaaactatggtcattagctgagatcgccacttcg
gacccaaagcagcatcagcatcagcacttgggacagaactgtcccccgggcgttggcctt
ttgacctccacggcgcccagcgcgtccccggcgggcgcagtctaccccgccacttccata
ttaggaagacctctttattacacctctccgttttatagtaattacacaaactatggcaac
ttcagcccgctgcagggccaagggatactgcgctataattcagctggggagggacttctg
cacaaacagagttgcgaccccctactaaagactaatccaaaccagactgaacaacatttc
agggcctccaatgcagaatccaaaaaagaccccaccgaggttttcacagtaagacaccag
tcttacctgtcgagttaa
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