Rhinichthys klamathensis goyatoka (western speckled dace): 130090443
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Entry
130090443 CDS
T09701
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130090443 (irx1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130090443 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
130090443
NCBI-ProteinID:
XP_056113796
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GARSKEDEDGNIIFGSDTEGDAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDEEKRGEL
ESLREKRRALALEAHEAFEKSKSNVISAGKEPSDGNNNNNNTRVLSPGRQGGFQVPVSNK
PKIWSLAETATSPDSSQKPTSPSVPATPAGTHPAFLPSHGLYTCQIGKFHNWTNGAFLGQ
NSLLNVRSFLGVNQHHHNHNHPVHSQQQQQQASTLAAANSDKAPEDLSPKHIDRENVLRN
ESPTQPLKSSFRPLHDSPRNQQESTQRVLTALSSA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggttacccgcagtatttgagtgcctcccaggcggtgtacgga
ggcgatcgcccgggagtgttaactccgtcgtcccgcggagggagcgcagagatcggggga
agcgcgtccgcggcggccgctgcggtgtcctcggtgttgggcatgtacccgtacgcacac
aactacagcgcctttctgccttacaccagcgccgatttggctcttttctcccaaatggga
tctcagtatgatttaaaagacagccctggcgttcaccctgcgagctttgctgcccacacg
agccctgccttctatccctacggccagttccagtatggagacccttccaggcctaaaaac
gccacacgggagagtaccagcactctgaaggcctggctcaacgagcacaggaaaaacccc
tatcccaccaaaggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcaa
gtgtccacctggttcgccaacgccagaaggagactcaagaaggagaacaaggtgacatgg
ggcgccagaagtaaagaggacgaagatggcaatattatatttgggagcgataccgagggg
gacgccgaaaagaacgaagatgaagaggaaatagatttggagagcattgatatcgacaag
atcgacgacaacgacggagatcaaagcaacgaggaggatgaggaaaagcgcggggagctc
gagagcttgcgggagaaacggcgcgcgcttgcgctggaggctcacgaggccttcgagaaa
tccaaatcaaacgtcatttctgccggcaaagagccgtcggacggaaacaacaacaacaac
aacaccagggttctgtcgccgggccgacagggaggttttcaagttccggttagcaataag
cccaaaatatggtcgttagcagaaaccgcaaccagtccagatagctcgcaaaaacctacg
tcaccctctgttcccgccactcccgcgggcacacacccggccttcctacccagccacgga
ctgtacacgtgccagattgggaagttccacaactggacaaatggcgcgtttctgggccaa
aactccctgctgaacgtccgatctttcttgggcgtcaatcagcatcatcataatcataat
caccctgttcactcacagcagcagcagcagcaggcctcgaccctggcagccgcgaacagt
gacaaggcgccagaggacctcagtccaaaacacatagatcgtgaaaatgtcctcagaaat
gaatcaccaacgcaacctttaaagtcatcgtttcgtcctcttcacgacagcccaagaaac
cagcaggaatcaacacagagggtcctaacagctctctcttccgcttga
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