Rhinichthys klamathensis goyatoka (western speckled dace): 130090466
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Entry
130090466 CDS
T09701
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130090466 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130090466 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130090466 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
Tissue_fac
Ig_CD22
C2-set_3
Glyco_hydro_39_C
Motif
Other DBs
NCBI-GeneID:
130090466
NCBI-ProteinID:
XP_056113825
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSRETESAISQYQQNASSYSSHSSKSTKGIRAATYTSLEEG
GISPLPKRAKPTYLAMDKENQIIGYVVPIFRGSYEFQSGLSDTEEARAKESAGYLARRDL
FSSGVESERTEYKSRRTVMRESAERISLNKRIHENEEYHKRLNEDSLMHTPEFVTAPRSH
TVWEKQCVRLHCTISGWPEPRVVWYKNNVSIDPMSKPGKYKLESSYNVHSLEINRCDFDD
TAQYRVSAMNSKGENSAFASVVVKRFKGEFDESLPSPRLQSRKVGFKAPCLEYGVTFETH
IVEKFGVSFGREGETLSLGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWVQTHWSGDRAT
LTLTHLNKEDEGLYTLRVITKSGFETHSAYVFVRDADGEVAGAPGAPLDVYCQDANKDYV
IVTWKQPAVDGGSTILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLVEGRSYVFRVRA
VNKAGMSHPSRVSEPVAAMDPADRTRKGASAPWTGQIIVTEEEPVEGVVPGRPCDLTVIE
ATKNYVVLSWKPPGDKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSY
CFRVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEGSREAKEL
VGYYIENSIVGSKTWEPCNNKPVKGTRFVCHGLTTGESYIFRVRAVNAAGISEFSQESEA
IEVKAAIASPAPPYGINVLECVRDSMVLAWKQPTFIGGADITGYFVDYREVINGVPGKWH
EANIRSVSERAYRVSELKENMLYQFQVRAANMAGVGIPSLTSEVFKCEEWTIAVPGPPHD
LQVQEVRKDSLVLLWKPPVYQGRDGVNGYYIDIKEAEADIEMWRGVNEKANDKIFMKIKD
LKEGQSYVFRVRAQNKAGVGRASEPTEPVEAVTKPGTTEIVVNVDDDGVVSLNFECSNLN
ADSKFVWSKNYVEMTEPERMTMETKGNKSKAIFNTPSEDDLGIYSCFVTHTDGESASYTL
SEEALKELLKVSHDHKFPIIPLKTELAVELLEKGKVRFWLQAEKISANGKVEYVFNDNMI
SQGEKYKMNFDKNTGIIEMFMESLGKEDEGTFTFQLQDGKATNQSSLVLIGDVFKQLQKE
SEFQRKEWHRKQGPHFVEYLGYEVTPECCVRLKCKVGNMKKDSVALWYKDGREVKVNEKL
DFSEGVLTLEITQISKKDAGVYEVVLKDDRGKDTSTLNLTDQGFKDMMNQVFSVIANSST
QLKIQSTEEGIRLYSFVNYYNDELHVTWHHKDAAIAFTERIKSGVVGEQLWLQISEPTDK
DKGKYAIEFFDGKGGLRRTVELAGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTI
QEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFESGKFASFTITGVNTADSGKY
SILVKNKYGTESGDFTVSVFIPDEEHGKKK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcaataccattctaccagaaacaccaccgccattacgaccgtggctaccgt
agccgggagacggagtctgctatcagccaataccagcagaacgctagtagttattcttcc
catagcagcaaaagcaccaagggcattagagctgccacatacacgtctctagaagagggg
gggattagccctctgcccaagagagccaagccaacctatctcgccatggacaaggagaac
cagatcatcggttatgtggtgcccatcttcaggggcagttatgagtttcaaagtggccta
tcagacactgaggaagcgcgtgctaaagagagtgctggctatctggcacgccgtgacctc
ttctctagcggcgtggagtcggagcgcaccgaatacaagtcccgcagaaccgtcatgagg
gagtccgccgagcgcatctcccttaacaagaggatccatgagaacgaagagtaccataaa
cgtctgaacgaggacagcctgatgcacacgcccgagtttgtgaccgcgcctcgatcccac
actgtttgggagaaacagtgtgtgaggctgcactgtaccatctcaggatggcctgaacca
cgcgtcgtgtggtacaagaacaatgttagtattgatcctatgtccaagccaggaaagtac
aaattggagagcagctataatgtccactccctggagattaacaggtgtgattttgatgac
actgcacaatatcgagtgtcagccatgaacagcaagggcgagaactctgcttttgcttct
gttgtcgtcaaaagattcaaaggagaatttgatgagtctctgccatctcccagactccaa
agcagaaaggtcggctttaaagcaccatgtctggagtatggtgtgaccttcgagacgcac
attgtggagaagtttggtgtgtcttttggacgtgagggtgagacgttgagtttgggctgc
tctgttatcatctacccttcacttcaacgcttccagcctgagatagagtggtacagagat
gataaactgctggtgccatcaaaatgggttcagacgcactggagcggcgacagagctaca
ctcactctcacacacctcaacaaggaggatgaggggctgtacacacttcgtgtcataacc
aaatctggctttgagacacattctgcatatgtctttgtcagagatgctgatggtgaggtt
gctggtgctcctggtgctcctttagatgtatattgtcaggatgccaataaggattatgtc
atcgttacctggaaacagcccgctgtggacggcggaagcaccattttgggctactttgtt
gataggtgtgaagttggcactacacactgggcacaatgtaacgacactcctgttaagttt
gcacgtttccctgtaactggtcttgtggaaggacgaagctatgtgttccgtgtgcgtgct
gtcaataaggctggtatgagccatccatcccgtgtctctgaaccagtagccgctatggac
cctgcagaccgcacaagaaaaggtgcctctgctccttggactggacaaataattgtaact
gaggaggaacctgtggagggagtggttcctggcagaccatgtgacctcactgtcattgaa
gccactaaaaactatgtggtgttgagctggaagcccccaggcgataaaggccatgaaggg
gttatgtattacgtggagaagtgcgtgtctggcacagacagctggcaacgagtgaacact
gaaatccctgtgaaatctccacgttttgctctttttgatctggctgagggcaagtcttac
tgtttccgcgttcgttgctgcaactcagctggtgttggagaaccatcagatccgacagaa
gccaccacggttggggacaagctggatatcccatcagcccctggccgtgtggtgcctacc
cgcaatacagacacatctgtggtggtttcatgggaagggtcacgtgaagctaaagagctg
gtgggctactacattgagaacagcattgtggggagcaaaacttgggagccatgcaacaac
aaaccagttaaaggcacaaggtttgtctgtcatggcttgaccacaggcgagagttacatt
ttccgagtgagagctgtcaatgctgctggaatcagtgaattctcacaagaatcagaagcc
attgaagttaaagctgctattgcttcacccgctccaccttatggtatcaatgtgttggaa
tgtgtgcgggactcgatggtactagcctggaaacaacccactttcatcggtggtgctgac
atcactggttactttgttgattaccgtgaggtcatcaatggagtcccgggaaaatggcat
gaggcgaacattaggtctgtcagtgagagagcttatagagtttcagagctgaaggaaaac
atgctgtaccaattccaggtacgtgctgccaacatggctggtgtgggcatcccgtctctt
accagcgaggtattcaagtgtgaggagtggactattgctgtaccgggaccaccccatgac
ctccaagtacaggaggtgcgaaaagactctttggtcttgctctggaaaccacctgtctac
cagggtcgagatggtgtcaatggatactacatcgacatcaaggaggctgaagcagacatt
gaaatgtggagaggggtcaatgagaaagctaatgacaagatattcatgaagatcaaggat
ctaaaggagggacagtcgtatgttttccgtgtacgcgctcagaacaaggctggtgtagga
agagcatcagaacctacagaaccggtggaggcagtgactaaaccaggtactaccgagata
gttgtgaatgtcgacgatgacggcgtcgtttcacttaattttgagtgctctaacctcaat
gctgactccaaatttgtctggtccaagaactacgtagaaatgacagaacctgaacgcatg
accatggagaccaagggtaacaagtccaaagccatctttaatacgccttcagaagatgac
ctgggcatctactcttgcttcgtgacacacactgatggagagtctgccagctacacactc
tccgaagaagctctaaaagaactcctgaaggtcagccatgaccacaaattccccatcatc
cctctgaaaacagagctggccgtggagctgctggagaagggaaaagttcgcttctggttg
caggctgaaaaaatctctgccaatggaaaagttgaatacgtgttcaatgacaatatgatc
tcccagggagagaaatacaagatgaactttgataaaaatactggcattattgagatgttc
atggagtctctgggaaaagaggacgagggaacattcactttccagcttcaagatggcaaa
gccactaaccagtccagtctagtgctaattggagatgtgttcaagcagttacaaaaggaa
tccgagttccagagaaaagaatggcatagaaagcaaggtccacacttcgtggagtatctc
ggttatgaagtcacacctgagtgctgtgtaagactgaagtgcaaggttggtaatatgaag
aaagactccgtggcgctgtggtataaggatggacgagaggtcaaggtcaatgagaaactg
gatttctctgaaggagtattaactttggagatcacccagatttcgaaaaaggatgctggt
gtatatgaagtagttctgaaggatgacagaggcaaagacacctccaccctcaaccttact
gaccaaggattcaaagacatgatgaatcaggttttcagtgttatcgcaaactcttccact
caactgaagatccagagcacagaggagggaatcaggctctactccttcgtcaactactac
aacgacgagctgcacgtcacctggcatcacaaggatgctgcgatcgccttcaccgagcgc
attaagagtggtgtggtgggtgagcagctgtggctgcagatctctgagcccaccgacaaa
gataaaggcaaatatgccattgagttcttcgatgggaaaggaggtttgcgcagaactgtg
gaactggctggacaagcatttgacgatgcatatgctgaatttcaaagactcaaggctgca
gctatcgcagaaagaaatcgcgctcgtgtggcaggtggtctgcctgatgttgtgaccatc
caagagggcaaggctttgaacttgacctgcaatatctcgggtgaccctgtaccagaagtc
acttggctgaagaatgaacgtgagatggtttcggacgatcactacattctgaagtttgag
tcaggcaagtttgccagtttcaccatcacaggcgtcaatacggctgactctggaaagtac
agcatcctggtaaagaacaagtacggtacggagagcggcgatttcaccgtaagtgtcttc
atcccagacgaggaacacggcaagaaaaaataa
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