Rhinichthys klamathensis goyatoka (western speckled dace): 130090497
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Entry
130090497 CDS
T09701
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03266
Virion - Herpesvirus
rkg04145
Phagosome
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
rkg05100
Bacterial invasion of epithelial cells
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
130090497 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130090497 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130090497 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130090497 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130090497 (itga5)
04810 Regulation of actin cytoskeleton
130090497 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130090497 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130090497 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130090497 (itga5)
04515 Cell adhesion molecules [BR:
rkg04515
]
130090497 (itga5)
04090 CD molecules [BR:
rkg04090
]
130090497 (itga5)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130090497 (itga5)
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin alpha subunits
130090497 (itga5)
CD molecules [BR:
rkg04090
]
Proteins
130090497 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
130090497
NCBI-ProteinID:
XP_056113865
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MGSKRHRSKISASSHNPKCSPMGLSLLILLPLSVAFNLDVENPAVYNGPNGSYFGYSVDF
YMTGSSVSIIVGAPKANTSQPNIREGGSVFYCPWSLSQSQCSSIEFDRQGDLNVTVNGTT
LHQGEFKSHQWFGATVRVHEDSVLACAPLYSWRTMADIPRADTTGSCFLAVENFTKFVEY
APCRTEFHGRKGQGYCQGGFSADFTQEGKVVLGGPGSYFWQGQLITAVKQEIVKAYYPGY
FLTSVDGQIQTKQKKEITFDDNYMGYSLAVGEFSGDDDEDFVTGVPRGVRLHGQVSILNG
SLDLLKTFTGEQMGSYYGYSVAVTDINNDGMTDLLVGAPMFMVRDSDGRLEELGRVYVYL
QNGPLDLTPQLPHLTGTQTFGRFGSSITPLGDLNQDGYNDVAISCPFGGENKQGLVLIYN
GHAGGLREKPSQVIAGQWASAAPSALPASFGYALRGGKDLDNNGYPDLIVGAFGQDAAFL
YRSRPIVNTSATLTVYPTMINPEEKVCPISRGNETLYVSCVNLSFCLTANGKHLPNDLEF
NVEVQLDRLKQQQKGAVRRALFLDTHLPAQKRTMTVPNGGRICSDTKIYLRDEKDFRDKL
SPIFVALNFSLNPQSAADRHGLRPILNYQTAELIEQKTQILLDCGEDNICVPDLKLSVHG
DRKEVYMGDDNSLTLTFNAKNDGGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYET
ENQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHKFVQFDLQIRSKNENNSQSEVVPY
KLEVVVQSDVILQGVSRPDKVFFPPPNWKLTKNVMVEQDVGPSVQHTYELVNNGPSRISH
TLLQLRCPMRLQSNRFIYPLEVTTEGPVNCTTHNIVNPLNLKLQQSSTEQPPLRDAAREH
HIEKRETHKGELSQLTNLSCSSVDCWTLTCNVGLLERGTSAILHVRSRIWAETFMENPYK
SFILECLASYKVEKMPYAILPKVTPSGAKKLVTPVVWNKPDSTYAVPLWIIILAILAGLL
LLALLIYVLYKLGFFKRTPYGTAMEKAQLKPQAASEA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggatccaaaaggcatcgttcaaagatttcagcgtcttcacacaacccgaaatgctct
ccaatgggactttcactcttgattcttctacctttgtctgttgccttcaacttggatgtg
gagaacccagcggtgtataacggacccaacggtagttacttcgggtactcggtggacttt
tatatgactgggtcaagtgtgagtattatagttggagcacccaaagccaacaccagtcag
cccaacatcagagaaggaggatcagtcttctactgtccatggagcctcagccaatcacaa
tgcagcagcatagagttcgatagacagggagatctaaacgtgactgtaaatggaacaact
ctgcatcaaggagagttcaaatcccatcagtggtttggagcaacagtacgagtgcatgaa
gatagtgtgctggcttgtgcccccctttactcatggagaaccatggcggacatacctcgt
gctgatactactggctcatgttttctggccgtcgaaaacttcaccaagtttgtggaatac
gctccgtgtcgcacagaatttcatggaagaaaaggacaaggctactgtcaagggggattc
agtgctgattttactcaggaaggaaaggtggtgcttggaggacctggcagttacttctgg
caagggcaattgatcactgcagttaaacaagaaatcgtcaaggcctattacccgggatac
ttcttgacatcggtggatggacagattcagaccaaacagaaaaaagagatcacatttgat
gacaactacatgggttactcattggctgtgggcgagttcagtggtgatgatgatgaagac
tttgtgactggagttcccaggggagtcagactccatggacaggtttccattctcaatggc
tctctggatttgctgaaaacttttactggagagcagatgggttcctactatggctactcg
gtggctgttactgacatcaacaatgacggaatgacagacctgctagttggcgctcccatg
ttcatggttcgtgactctgatgggaggttagaggagttgggtcgggtctacgtatacttg
cagaatggacctctggatctcacacctcagctacctcacctcaccggcacacagacgttc
ggccggtttggcagctccattacccctcttggagatctcaaccaagatggttacaacgat
gtggccatcagctgtccgtttggtggggaaaataaacaaggattggtgctcatctataac
ggacatgctggaggactcagggaaaagccctctcaggtgatcgctggccaatgggcttct
gccgcaccgtcagctctacctgcgagttttggttacgcccttcgtggaggcaaagacctg
gataacaatggctacccagatctcattgttggtgcatttggtcaggacgcagcctttctt
taccggtctcgtcctattgtgaacaccagtgccaccttgactgtctacccaactatgatt
aatcctgaggagaaagtttgccccataagccgtgggaacgagaccctctatgtgtcctgt
gtcaacctgagcttttgcctaacagccaatgggaagcacctaccaaatgatctcgagttt
aacgttgaagttcagctggaccgtctgaagcagcagcagaagggggccgtacggagagct
ctgtttttagacacccatcttcccgctcagaagaggactatgactgtgccaaatggaggc
agaatctgcagcgacactaagatctacttgcgggatgagaaggacttcagggataagttg
tctcccatcttcgttgcgctcaacttcagcctgaaccctcaatccgcggcagacaggcac
ggcctgcggcccatcctcaactaccagacggcggagctcatcgaacagaaaacccagatt
ttattggactgtggagaggacaacatttgcgtccctgacctgaaactctccgtgcacggg
gacaggaaggaagtgtacatgggcgatgacaactctctgaccctgactttcaacgcgaag
aacgatggaggcggagcttatgaagccgagctgtatgtggtcttgccaccagaggccgac
tacagcggaatagcccgcaataatgagagtctgacccagctgacctgcagttatgagacg
gaaaatcagacccgttacctcagctgtgacctggggaaccccatgaaatccggcaccagc
ctatgggccggactgcgattcactgtaccacgtctcaaggacacacacaaatttgtgcag
tttgacctacagatccgtagtaagaatgagaataactcccagagtgaagtcgtcccctac
aagttggaggtggtggtccagtctgatgttattctgcagggtgtttccagaccagacaag
gtcttctttcccccaccaaactggaagttgaccaagaatgtaatggttgaacaggatgtc
ggaccctccgtccagcacacttacgagttggtgaacaacgggccgagccgcatcagtcac
actctgcttcagctcagatgccccatgagacttcaaagtaacaggttcatttacccactg
gaggtcacgacggaggggcctgttaactgcaccacccacaacatagtcaaccccttgaac
ctcaagctccagcagtcttctaccgagcagcctcctttgcgagacgcggcacgggaacac
cacatcgagaagagggaaacgcacaagggcgagctgtctcagctgaccaatctgtcttgc
tccagtgtggattgctggactcttacgtgtaatgttggcctgttggagcgagggacgagt
gccatactgcatgttcgctcgcgaatctgggcagaaacatttatggagaatccttataaa
agctttattctggagtgccttgctagttacaaagtggaaaagatgccatatgccattttg
cccaaggtgactcctagcggagctaaaaagttggtgactcctgtggtctggaataagcca
gacagcacatacgccgttcctctgtggatcatcattctggctattctagccgggcttctg
ctgctcgcactgctgatctacgtcctctacaagctcggcttcttcaagagaactccgtac
ggcaccgccatggaaaaagcccagctcaaacctcaggctgcatccgaggcctaa
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