Rhinichthys klamathensis goyatoka (western speckled dace): 130090550
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Entry
130090550 CDS
T09701
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130090550 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130090550 (hnrnpa1b)
03041 Spliceosome [BR:
rkg03041
]
130090550 (hnrnpa1b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130090550 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
130090550 (hnrnpa1b)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
hnRNP proteins
130090550 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130090550
NCBI-ProteinID:
XP_056113949
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYAGVTEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEEDH
LRGYFDVFGKIEAVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGGGGGSNGGGGNFNRYGNNGGYNNDFGGGGGGGGNRDG
YFGRGGRGGNGGGGGYGGDCYNNGFGGDGGYGGGGGGGSGPGNYGGNRGYGGGGGGQGYG
NQGGGYGGGGNSSGGYNDNYNNGNGNFGGGNFGGGGSGGGASSGGGNYSDFGSYNNQQSN
YGPMKGNFGGGGGSSGSSSGGGRNSGPYGGGYGGGSSGGGGYGGGSGGRRF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagagggccaaccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccacagatgatagtttgcgggcgcattttgaacaatggggaacccta
acagattgtgtggtgatgaaagacccaaacacaaaacgatccaggggttttgggtttgtc
acctatgctggtgtgactgaagtcgatgctgctatggatgcacgcccccacaaggtcgat
ggtcggcttgtagagcccaaacgagccgtgtctcgagaggactccaacaagccatttgct
cacacaactgtgaaaaagatctttgtgggtggcattaaggatgacactgaggaggaccat
cttcgtggctacttcgatgtgtttggaaagattgaagccgttgagataatggtcgaccac
aagaccggaaacaaaaggggctttgcctttgttacgtttgatgaccatgattctgttgat
cgtattgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcagaaaagct
ctttctaaacaagaaatgcaaaacactgggatgaacatgagaggccgtggtggtggtggt
ggtggaggtggcggcggcggcagcaacggtggaggtggaaacttcaacagatatggcaat
aatggtggctacaacaatgactttggaggcggtggtgggggcggtggcaaccgcgatgga
tacttcggaagaggaggtagaggaggtaatggtggaggaggtggttatggaggggactgc
tacaacaatggatttggtggagatggtggttatggaggtggtggaggcggcggcagcggt
cctggtaactatggtggaaatcgtggatatggaggtggtggaggaggacaaggttatggc
aaccagggcggaggttatggtggcggtggaaacagcagtggtggatataatgacaattac
aacaatggcaatggaaactttggaggtggtaactttggtggcggcggcagcggcggtggc
gccagcagtggaggcggtaactacagtgacttcggcagctataacaaccagcagtccaat
tatggtcccatgaaagggaactttggaggtggtggtggtagtagtggcagcagcagcgga
ggagggaggaacagtggcccatatggtggtggctatggaggtggatccagtggtggtggt
ggatatggtggtggctctggtggtagacggttttaa
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