Rhinichthys klamathensis goyatoka (western speckled dace): 130090588
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Entry
130090588 CDS
T09701
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
rkg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130090588 (ddx19a)
03015 mRNA surveillance pathway
130090588 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130090588 (ddx19a)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130090588 (ddx19a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130090588 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130090588
NCBI-ProteinID:
XP_056114005
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MSTDSWALAVDKQESTPKSIKNSRVLEAGDGALTLHGTNGNDVDKPEEEEKEDKATQSLL
NKLIRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENA
LPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPGLKWPQCLCISPTYELALQTGKVI
AQMGQFYPEVKLAFAVRGHKMERGVKIKEQIVIGTPGTVLDWCVKLKLIDPKKIKVFVLD
EADVMIATQGHQDQSIRIQRMLSKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEE
TLDTIKQYYVLCNCKEDKFSALCNIYGAITIAQAMIFCHTRKMANWLSGQLSKEGHQVAL
LSGEMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPDNET
YLHRIGRTGRFGKRGLAVNMVDSQRNMEILKTYERHFNKKIVRLDTDDLDEIERIAN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgattcgtgggctttagctgtggacaaacaagagtctacacccaagtctatt
aagaactcacgggttttggaagcgggagatggagctttaacgttacatgggactaatggt
aatgatgttgacaaacccgaagaagaggaaaaagaggacaaagccacacagtctctcctg
aataaattaatcagaagcaatgtggtcaacaacacaaaccaagtggaggttcttcagaga
gacccaaactcaccactgtattcagtcaagacgtttgaggagctgaggctgaaacctcag
ttgctcaaaggcgtctatgaaatgggcttcaacagaccttctaaaatccaagagaatgcc
cttcccatgatgctcgccgaaccacctcagaatctgatcgctcagtctcagtctggtact
ggtaaaacagccgccttcgtgctggccatgctcagtcatgtggacccaggcttaaaatgg
cctcagtgtttgtgcatttctcctacatatgagctcgctctgcagacgggtaaagtcatc
gcgcaaatgggccagttttaccctgaagttaaactggcatttgctgttcgaggacataaa
atggagcgtggcgttaagatcaaggagcagatcgtcatcggcacacctgggacagttctg
gactggtgcgtcaagctgaagctcatcgacccgaaaaagatcaaagtgtttgttctggac
gaggctgatgtcatgatcgccacacagggacaccaagaccagagcatccgcattcagaga
atgctatccaaaggctgtcagatgttacttttctctgctacctttgaggactctgtgtgg
aagtttgccgagcgggtcgtgccggatcccaacatcatcaagctaaaacgtgaagaggag
acgctggacactatcaagcagtattatgtgctctgcaattgcaaggaggacaagttcagc
gcgctctgcaacatctatggagccatcactatcgcacaagctatgatcttctgtcatact
cgaaaaatggccaactggctttccggccagctgtctaaagagggccaccaggtggcgctc
ctcagcggggaaatggtggttgagcagagagcagcggttattgaacgtttcagagatggc
aaggagaaagttctcatcactactaatgtctgtgcaagaggtattgatgttgagcaagtg
tcagtggtgatcaactttgaccttccactggacaaagatggcaatccagacaacgaaacg
tacctccaccggatcggtaggaccggacgctttggcaagagaggactcgctgtcaacatg
gtggacagtcagcgcaacatggagattctcaagacatacgagaggcattttaataagaaa
attgtgaggctggacacggatgatctcgacgaaattgaaagaatcgccaactga
DBGET
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