Rhinichthys klamathensis goyatoka (western speckled dace): 130090624
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Entry
130090624 CDS
T09701
Symbol
ebf3a
Name
(RefSeq) transcription factor COE3a isoform X1
KO
K09103
early B-cell factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130090624 (ebf3a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130090624 (ebf3a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
130090624
NCBI-ProteinID:
XP_056114052
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MFGIQENIPRGGTTMKEEPLGSGMNSVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKDKEPNSEKTNNGIHYKLQLLYSNGV
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTATPYLENAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTM
LVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQR
LQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNH
NQIPSLANTASHGGMMGVNSFGSQLAVNVSETSQVGYSRNTSSVSPRGYVPSSTPQQSNY
NTVSNSMNGYGNTGMPNLGVPSSPGFLNGSSANSPYGSKYQVVPSSPTMAASSVSLSSNC
SSTHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaaatataccgagaggggggaccactatgaaagaggaaccgctg
ggcagtggtatgaattcggtccgatcgtggatgcacacggctggggtggtggatgcgaac
acggccgcccagagtggagttggtctggcacgggcgcattatgagaaacaaccgccatcc
aacctcagaaaatccaattttttccacttcgtcctggctctttatgacagacagggacag
ccagtggagatcgaaaggacagcttttgtggactttgtggaaaaggataaagaacctaac
agtgaaaaaactaacaatgggatacattacaaactacaactattgtacagcaacggcgtc
agaacagaacaggatctttatgttcggttaatcgattccatgacaaaacaggctattatt
tatgaaggacaagacaaaaacccagaaatgtgccgagttcttctcacacacgaaattatg
tgcagtcggtgttgtgacaaaaaaagctgcggaaacaggaacgaaacgccctcagatccc
gtgatcatcgacaggttctttttgaaattcttcctcaagtgtaatcagaactgcctgaag
aatgcaggaaacccacgggacatgcgcagattccaggtcgttgtatcgacaacggtcaat
gtggacggtcacgtgttggccgtgtcggacaacatgttcgtccacaacaactcaaaacac
ggcagaagagctcgccgtctagatccctcagaaggtacggccactccttatctggagaat
gcagctaccccgtgcataaaggccattagcccgagtgaaggctggaccactggaggagcc
acggtcatcatcatcggcgataacttcttcgatggactacaggtcgtgtttggcaccatg
ctagtatggagtgagctcattacgccccatgccatccgagtgcagacccctccaagacac
atcccgggcgtcgtagaagtcaccctgtcctacaagtcaaagcagttctgcaaaggtgcg
ccgggacgattcgtgtatacagctttgaacgaaccaactattgactacggcttccagaga
ctgcagaaggtcattcccagacatccaggtgatccggagaggttgcccaaggaggtgttg
ctaaagagagccgctgaccttgtggaagcactgtacgggatgccacacaacaaccaggag
atcattctaaagagggccgcagatatcgcagaggctctgtatagcgtcccacgtaaccac
aaccagatcccgtccctcgccaacacggcctctcatggcggaatgatgggggtcaactct
ttcggcagtcagctcgctgtcaacgtctcagagacctcacaagtgggctacagtcgcaac
acgagcagcgtgtcgcctcgcggttacgtgcccagcagcaccccgcagcagtccaactac
aacaccgtcagcaacagcatgaacggctacggcaacacgggaatgcccaacctcggtgtg
cccagttcaccgggcttcttgaacggctcctctgcgaattctccctacggcagtaagtat
caagtagttccgtcgagccctaccatggcagcctcttcggtcagcctctcttcaaactgt
agcagtacacacggcattttctcattctcacctgccaatgtcatctctgcagtgaaacaa
aaaagcgcctttgctccagttgtcaggccccaagcatctccacctccttcttgcaccagt
gcaaatggcaatggacttcaagccatgtccggactggtggtcccacccatgtaa
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