Rhinichthys klamathensis goyatoka (western speckled dace): 130090629
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Entry
130090629 CDS
T09701
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015
mRNA surveillance pathway
rkg04261
Adrenergic signaling in cardiomyocytes
rkg04382
Cornified envelope formation
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130090629 (ppp2r2d)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130090629 (ppp2r2d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130090629 (ppp2r2d)
09158 Development and regeneration
04382 Cornified envelope formation
130090629 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130090629 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130090629 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130090629 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130090629 (ppp2r2d)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130090629 (ppp2r2d)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130090629 (ppp2r2d)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
130090629
NCBI-ProteinID:
XP_056114071
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MMAGVGGGNDFQWCFSQVKGSIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQREQ
ESKNRPLSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTI
KLWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYH
INSISVNSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQC
NVFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMT
GSYNNFFRMFDRNTRRDITLEASRENSKPRAMLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPKENVIAVAATNNLYIFQDKLN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaggggttggtggaggcaatgatttccagtggtgcttctcccaggtcaaagga
tccatagatgaagatgttgcagaagcggacattatctcaaccgttgaatttaactattct
ggggagttactagccacaggagacaaagggggaagagtcgtcatatttcagagagaacag
gagagtaaaaaccgcccactctcaagaggggaatacaacgtgtacagcacttttcagagt
catgagcctgagtttgattacttgaaaagtttagaaatagaggagaagatcaataaaatc
agatggctcccacaacagaacgctgcacactttctcctgtccacaaatgacaaaaccatt
aaactatggaagattagtgaaagggacaaacgagcggaaggatacaaccttaaagatgaa
gatggaagactgcgagatccgtttcgaatcacatcactacgggttcctgtgctgatgccg
atggacttgatggtggaagccagcccgcgcagaatatttgcaaacgcacatacatatcac
atcaattccatttcagtaaatagtgattatgaaacatacctttctgcagacgacctcaga
ataaacctctggcatttagaaatcacagatagaagttttaacattgtagatataaaacca
gccaatatggaggagctgacggaggtgataacggcggccgagtgtcacccacaccagtgt
aacgtctttgtatacagcagtagtaaaggaaccatccgcctgtgtgacatgagggccgcc
gcgctctgcgatagacatagtaaattttttgaggagccagaagatcccagcagccggtcg
ttcttctcagaaatcatctcctccatatccgacgtcaagttcagccacagcggtagatac
atgatgacccgcgattacctctccgttaaagtttgggacctgaacatggagaaccggcct
gtagagacctaccaggtacacgagtacctacgtagcaagttgtgctcgctctacgagaac
gactgcattttcgacaagtttgagtgctgttggaacggttcagacagtgccattatgacg
ggttcctacaacaacttctttaggatgtttgacaggaacacgcgcagggacatcacactg
gaggcgtcgagggagaacagtaaaccccgtgccatgctcaaaccccgcaaggtctgcacc
ggcggcaaacggaagaaagacgaaatcagcgtggacagcctggacttcaacaagaagatc
ctacacaccgcctggcacccgaaagagaacgtcatagctgtggccgccaccaacaacctg
tatatattccaggacaaacttaactaa
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