Rhinichthys klamathensis goyatoka (western speckled dace): 130090769
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Entry
130090769 CDS
T09701
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130090769 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130090769 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rkg04091
]
130090769 (lman1)
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
130090769 (lman1)
Lectins [BR:
rkg04091
]
L-type lectins
130090769 (lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
GCN5L1
TPR_10
P11_C
Motif
Other DBs
NCBI-GeneID:
130090769
NCBI-ProteinID:
XP_056114282
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MAVPIAKFLAAYAYLLLISLIFPHVFADNAAGDLPHRRFEYKYSFKGPHLTQSDGRIPFW
IHTGNAIPGADQIRITPSLRSQKGGVWTKSPVSFEHWEAEVAFRVSGRGRMGADGLALWF
TAGQGLDGPVYGAADQWNGVGIFFDSFDNDGKKNNPAVLVVGNNGKLVYDHQNDGSTQAL
GTCLRDFRNKPYPVRAKIIYYKQTLSVFINNGFTPDKDDYEFCTKVENMVIPESGYFGIS
AATGGLADDHDVLSFLLFRLTEPGQNLPPPEKEIPKEEKDKYQEEFENFQQALDKRKEEF
QKEHPDVQGQPIEDLFESVNDREIRQVFEGQNRIHLEIKQLNRQLAMILDEQRRYVSVIT
EEISKRAPQAQSGQAPTHEMDTIINTQQEVLRNLNEVRDSLSGSLKQLAVGQQQGNAGGL
GSYETIQHFNDIKEHLHVVKRNIEHIIQKNVNPAEKAQCPELPSLPSCLSTTHFLVFIVI
QSLLFFGYVMYKSQQEAAAKKFF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcccatagctaagttcctggcagcttatgcctatttattactaatttcttta
atatttccgcacgttttcgccgacaacgctgccggggacttgccgcaccggcgttttgag
tataaatacagtttcaaagggccacatctgacacagagtgatggaagaatcccattctgg
attcatactgggaatgccattcctggtgcggatcagattcgaatcactccctctctgagg
agccagaagggtggggtatggacaaaatcccctgtaagttttgaacattgggaagctgag
gtggcattccgtgtgtccggacgggggcgaatgggagcagatggattggccttatggttc
acggctggtcaaggtctggatggtcctgtgtacggggctgctgatcagtggaacggcgtg
ggaatattctttgactcttttgataatgatgggaagaaaaacaaccctgctgtcctggtg
gtgggtaacaatggaaaacttgtttatgaccatcaaaatgatggctcaacgcaggctctg
ggtacatgtcttagagacttcagaaacaaaccttaccctgtacgtgccaaaatcatctac
tacaagcaaactttatcggttttcatcaataacggcttcactcctgataaagacgattat
gagttctgcacgaaagttgaaaacatggtcattcccgagtctggttattttggcatctct
gcagccaccggaggacttgcagatgaccatgatgtgctgtcatttttgctgttcagactt
acagagcctgggcagaatctgcctcccccagaaaaagagattcccaaagaggagaaggac
aagtaccaggaggaatttgagaatttccaacaagcgctggacaaaaggaaagaggagttt
cagaaagagcaccctgatgtccaggggcagcccattgaggacctgtttgaaagcgttaac
gaccgggaaatccgtcaggtgtttgaggggcagaatcgaatccacctggaaatcaagcag
ttgaacaggcagctggccatgattctggatgaacaacgccgttatgtgtcagtcatcaca
gaggagatctccaaacgcgcaccacaagcacagtcaggacaggctcccactcatgaaatg
gacaccattattaatacacaacaagaggttttgagaaaccttaatgaagtaagggactcg
ttgtcaggctcactgaagcagttggcagtgggtcaacagcagggtaacgcaggcggactc
ggatcatacgagacaatccagcacttcaatgacatcaaggagcatttgcatgtcgtcaag
aggaacatcgaacacatcattcagaaaaatgtgaatcctgcagaaaaggcacaatgtcct
gaacttccttccttaccctcctgcctctctaccacacacttcctggtcttcatcgtcatt
cagtccctcctcttcttcggctacgttatgtacaagagtcaacaggaagcagcagcgaag
aagtttttttga
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