KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130090784
Entry
130090784         CDS       T09701                                 
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020  Calcium signaling pathway
rkg04080  Neuroactive ligand-receptor interaction
rkg04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    130090784 (grin1a)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    130090784 (grin1a)
   04082 Neuroactive ligand signaling
    130090784 (grin1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rkg04040]
    130090784 (grin1a)
Ion channels [BR:rkg04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   130090784 (grin1a)
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 Peripla_BP_6
Other DBs
NCBI-GeneID: 130090784
NCBI-ProteinID: XP_056114319
LinkDB
Position
Unknown
AA seq 970 aa
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSFDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTTLEGTCKEEYTPNGVLIKKVICTGPNETIPGNPSGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDTKESSGSQAVGAAGTP
SLPSSSVETQDDRKSGRADSDPKTKPSFRSISTNLASSIKRRRSSKDTQFPPTDITGQLN
LSDPSVSTVV
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgcgtctgcttctgctggctgcgttgttctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacatcggggccgttctgagccagaagagatacgagcaggtgttcaag
gatgcggtcacccaggcgaaccaggtgtacggaagggataaattcaagttgaccgcaatc
tctgtcactcacaaagccaatgcgattcagatggcgctgtctgtgtgtgaggatcttatt
tccagtcaggtgtacgccatcctggtgagccatccaccacagtctaatgaccatctgacg
cccacgccggtctcctacaccgcagggttctaccgcatacctgtagtagggctcaccacc
aggatgtccatttactcagacaagagcatccatctctcgttcctgcgtacagtaccgcca
tattcccaccaggcacatgtgtggtttgacatgatgagggagttccgctggaatcacatc
attctaatcgtcagtgacgaccatgaaggcagagcggcgcagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tttgacaacaagagaggacctaaggccgagaaagtgcttcagttcaaccaagagactaac
ttaactgctctgctcctggaggccaaagagctggaggctcgagtgatcattctctcagcc
agtgaggaagatgcagccgccgtgtacaaaacagcgcgcttcctgaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gatgggctgattggcctccagctcatcaacggcaagaatgagtcggcacacatcagcgat
gccgttgccgtcgtagcccagtcaatccaagagctctttgagaaagagaacatcacagaa
cctccaaggggctgcgtgggcaataccaacatctggaagaccgggccgctctttaaaagg
gtattgatgtcttctaagtacccagagggcctaacaggacgcgttgagttcaatgacgac
ggagacagaaaatatgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataagcagaggaagatcatttggcct
ggaggtgaaacagagagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactacgctggaagggacctgcaaggaa
gagtacacacctaatggagtcttaattaaaaaggtgatctgcacaggaccaaatgagacc
atcccaggtaacccatcaggacgcccaattgttccccaatgttgctacggattttgcgtt
gaccttctgatcaaattggcaatgaccatgaacttcacctatgaagtacacctggtggca
gatggaaaatttggaacacaggaaagagtaaataacagtaacaagaaggaatggaacggc
atgatgggtgagctcctgggtggccttgctgatatgattgtcgctcccttgacaatcaac
aacgaacgagcccagtacatagaattctccaagcctttcaaataccagggactgactatc
cttgtgaaaaaggaaattcctcgtagtacactggactcgttcatgcagccatttcagagc
acattgtggctactggtgggtctatcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaggaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgtcttgttgaactctggaatcgga
gaaggtgccccacgaagcttttcagcaagaattttgggaatggtgtgggctggctttgct
atgattatagtagcatcttatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctaaggaacccatcagacaagttcatc
tatgccacagtgaagcagagttcggtggatatttacttccggcggcaagttgagctgagc
accatgtaccgccacatggagaagcacaactatgagagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagtt
gctgggggcattgcagcagggatcttcctcatctttatcgaaattgcatacaagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaag
aacctacaggacactaaggagagctcagggagtcaagctgtgggtgcggctgggactcca
tctttaccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagacagc
gacccaaaaacgaaaccctcttttaggtccatcagtaccaacctggcctccagcatcaag
agacgtaggtcctccaaagacacgcaattcccacccacagacattacgggccaactcaac
ttgtccgacccgtctgtcagcacggtggtgtga

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