KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130090800
Entry
130090800         CDS       T09701                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130090800 (ubap2a)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130090800 (ubap2a)
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    130090800 (ubap2a)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130090800 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N Methyltransf_32
Other DBs
NCBI-GeneID: 130090800
NCBI-ProteinID: XP_056114368
LinkDB
Position
Unknown
AA seq 1194 aa
MMTSVGIERARGTRDKALPTTTQTTQPQKQLQATAEQIRLAQMIYDKNDADFEDKVKQLI
EVTGKNQDDCMVALHDCNEDVNRAINFLLEGTSDATSWETVGKKKSLGKDGTSTESKENK
ENREKKERESSRGRGGASRRGRGTSRNRPARTEENGVEPAPVERGADRGRRGRGRVSGGR
GRGRAPVTSRFTAQGMGTFNPADYTTDSGTSNSHADVWETGANDTTDGTGERLTSVAQNF
SQSFGPLSSLFLSLTHSVPWQNTLDEWAAEDWSEDLSETKVFTSSCAPPTENHITPGQSL
DLSSLLQKPVDREEAGGLKAVGSSQGLGHSLVFTNSHHQPARNGGTSSGSNSYTHATLSS
VLGSGFGELGGPKLGQTAGQQILEQLKGPGLGQLTSPPSSTGTNCTPVGGLVGTGISVPS
SSWDRKPPGTQSSASLPSQFSREFQMQPEPSLVLSQLAQRQQGSLTHTGPLARQPSPPPL
SAPSPASGTPEAFPKAPEPSQHRDGPSMAPSQAAESQGSSTQQRQIKTQKRRIPPTSKIP
ASAVEMPGSADVSGLNVQFGALDFGSESALPDFGQSENCNSEPIREAAVVPQSQSSLYSK
PISESMTSPVPLLLPLASSDSIYPSPSVPLPSLAPSHTTPSSVTAPSSSSSSSSSSAASS
TGNSFDCGVAPHSRLTFSQSKELSGPVTNGFNGARTSAALDTTSSSSTPKQESPSLVSST
SVAPSAPSSLLPPSVTPHSSVLPSLASELSSASLPPLSSHVSSGHPSVSALCTTSSLTYT
SVDSVNSLAPSSMAFSSQPVSALSSGSVNSATSGGNSLHGSGILGHGTNCSALSGIRAAP
LLSSSSGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMDYYGIT
FPGPTPTLSGRDGSLANNPYSGDITKFGRGESASPAPSASLSAAHGPQTAQPPQAQSQGQ
NQPQPQGHHNTQQTFLNPALPPGYSYTGLPYYPGVPGVPSAFQYGPTMFVPPSSAKQHGM
GLSNPTTPFQQPSGYGQHAFSSGYDDLTQGPAGTEYSKGYSNSSQTQAKSAASGPGKVVS
VTSSNSGVPDISGTVYNKTQPFDKQGFHAGTPPPFNLPSALGGTGPLTPGAAPGYPAPFL
HILPAHQQPHSQLLHHHLTQDGQGGPNQRSQSSVMQQKTQVNKSNYGSSPYWGN
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgatgacctcggtgggcatcgaacgagcccggggcactcgggacaaagcgctgcccact
accacacagaccacacagccacagaaacagcttcaggctacagccgaacagatccgactg
gctcagatgatctatgacaagaacgatgcagattttgaggataaagtgaagcagctcata
gaggtcacagggaagaaccaagacgattgcatggttgctctccatgactgcaacgaggat
gtcaacagagccatcaacttcctgcttgagggaacctctgatgcaacctcttgggaaacg
gtggggaaaaagaagagtcttgggaaggatggaacctccactgagagtaaggagaacaag
gagaacagggagaagaaagagagggaaagcagcaggggtcgtggaggagcgagtcgccgt
ggcagagggaccagtcgcaacaggccagcaaggacagaggagaatggtgtggaacctgct
cctgttgagagaggtgctgaccgtggccgcaggggaagaggcagagtgtctggaggtaga
ggcagaggtcgggctccagttaccagcaggtttacagcacaggggatggggacctttaac
cctgcagactacaccacagacagtgggacatcaaactcgcacgctgatgtttgggagacg
ggggccaatgacactacagatgggacaggtgagagactcacctctgttgcacagaacttt
tcacaatcctttggcccactctcatctctctttctctctttgacacattcagtgccatgg
cagaatactctggacgagtgggcagctgaagactggagtgaagatctctccgagaccaaa
gtgttcacgtcctcttgtgcacctccaactgagaaccacatcacacctggccagagtctg
gatctgtcgtctctgctgcagaagcctgtggatcgagaagaggcggggggtctgaaggcc
gtgggctcctctcaggggctcggccacagtctggtcttcaccaactcccaccaccagcct
gctcgaaacggaggcacatcttctggctccaacagctacacacacgccactctgtcctct
gttttgggttctggttttggagagctgggtggtccaaaactcgggcagacggccgggcag
caaatactggaacagctgaaggggcctggtcttgggcagcttacctccccgccctccagc
acagggaccaactgcacccctgtaggggggctggtggggacagggatttcggtgccctcc
tcttcttgggacagaaaacctcctggaacacagagctctgcttcactcccgtcccaattc
agtcgggagtttcagatgcagccagagccatctttggtgctaagccaacttgcccagcga
cagcagggctctctgacccacacggggcctctagccaggcagcccagccctccccctctg
agtgccccttcgcctgcctcgggaacaccggaagcctttccaaaagcgccggaaccatca
cagcaccgtgacgggccctcaatggccccctcacaggctgccgagtctcagggcagcagc
acacagcagcggcagataaagacccaaaagcgacggatacctcccacttccaagattcct
gcatcagcggtagagatgcccgggtcagcagatgtgtctggtctaaatgtgcagtttggt
gccctggactttggttcagaatctgccctgccagacttcggccagtcggagaactgcaac
agtgaacccataagggaggctgcagtggttcctcagtcacagagcagcctttactctaaa
ccaatcagtgaatctatgaccagtccggtccctttgctgctgcctctggcctcttctgac
agcatctacccctctccctcggtacctctccccagcctcgccccctcccacaccaccccc
agctcggtgacagccccctcgtcctcctcatcttcctcttcctcctccgctgcatcatcg
acgggtaacagctttgactgcggtgtggcccctcactcaagactgaccttttctcagagc
aaggagctttctggacctgtgacgaacggtttcaatggtgcgaggacctctgctgcttta
gacaccacatcgagttcctccactccaaaacaagagtctccttctctggtcagcagcaca
agtgttgccccctctgccccatcctcactgttgcccccttccgttacaccacacagctct
gttttgcccagcctggcatctgagctgtcctctgccagcttacctcccctcagcagtcat
gtgagcagtggccatccctctgtgtcggcactttgcaccacatcttcacttacatataca
agtgtggacagcgtgaactctctcgccccctcatcgatggcattttcctcccagcctgtg
tccgctctgtccagcggcagcgtgaacagtgctacgagtggcggcaacagtctgcacggg
tctggaattttgggtcatggcaccaattgtagcgcactttctggtatcagggctgccccg
ctactgtcttcctccagcggtaaagctcctcctaatctctctcagggggttcctccactg
ctgcctaaccagtacatcatgggacccggaggtctgttgcctgcctacccgcagatttat
ggctatgaagacctccacatgctccaatccagactaccaatggattactatggaatcaca
ttcccagggccgactcctacgctgtctggcagagatggaagcctcgccaacaacccttac
tcaggtgacatcacaaagtttggccgaggtgaatccgcctcaccagcaccctctgccagc
ctgtctgctgctcacggcccacagacggcacagcctccgcaggctcagagccaaggacag
aaccagccccagccgcagggccaccacaacacccaacagacctttctaaacccagccctc
ccccctggatacagctatacaggccttccctactaccccggggtgcctggcgtgcccagc
gcattccagtatggccccaccatgttcgtgccccctagctcggccaagcagcatggcatg
ggtctgagcaaccccaccacgccattccagcagcccagcggctacggccagcacgccttc
agctcagggtatgatgacctgacgcaaggcccagcaggaactgagtacagcaaaggctac
agtaactcttctcaaacacaggccaaatctgctgcctctggcccagggaaagttgtctct
gtgacatctagcaattctggggtgccagacatcagtggaactgtttacaataaaacacag
ccgtttgataagcagggtttccatgctggcacacctcctcctttcaacctcccctcggct
ctgggcggcacgggacctttgacccctggtgctgcccctggttatcctgctccattcctt
cacattctgccggcacaccagcagccccactcacagctgctccatcatcacctcacccag
gacggacagggtgggccaaaccagagaagccagtctagcgtcatgcagcagaagacccag
gtcaacaagtccaactatggcagctctccctactggggcaactga

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