KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130090946
Entry
130090946         CDS       T09701                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03010  Ribosome
rkg04120  Ubiquitin mediated proteolysis
rkg04137  Mitophagy - animal
rkg04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    130090946
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130090946
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130090946
   04137 Mitophagy - animal
    130090946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rkg03011]
    130090946
   04121 Ubiquitin system [BR:rkg04121]
    130090946
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130090946
Ribosome [BR:rkg03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    130090946
  Archaea
    130090946
Ubiquitin system [BR:rkg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   130090946
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130090946
  Exosomal proteins of colorectal cancer cells
   130090946
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 Dsc3_N TBK1_ULD
Other DBs
NCBI-GeneID: 130090946
NCBI-ProteinID: XP_056114567
LinkDB
Position
Unknown
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacgctgacgggtaaaaccatcacactcgaggtcgagccgtca
gactctattgaaaatgtcaaggcaaagatccaggacaaagaagggattcctccggaccag
cagaggctgatcttcgctgggaagcagctggaggacggacgcacactgtccgactacaac
atccagaaggagtccacgctgcacctggtgctccgtctgcgcggcggagccaagaagagg
aagaagaagtcctacaccacgccgaagaagaacaaacacaagaggaagaaagtgaagctg
gccgtgctcaagtactacaaggtggatgagaacgggaagatccaccgtctgcggcgcgag
tgtccggctgatgagtgcggcgccggcgtcttcatggccagtcacttcgacaggcattac
tgtgggaagtgctgcctcacctactgcttcaacaaacccgaggacaagtga

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