Rhinichthys klamathensis goyatoka (western speckled dace): 130090992
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Entry
130090992 CDS
T09701
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130090992 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
130090992 (gpc6a)
Proteoglycans [BR:
rkg00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130090992 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
Others
130090992 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Fz
MRP-S23
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
130090992
NCBI-ProteinID:
XP_056114636
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All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MWKTPVVVFTSLSLLLSLSCAGDVKSRSCSDVRQAFTTKGFSLHNVPHQEIQGEHLRVCS
QGYTCCTSDMEDRLGQQSKVDFEKLVDESSHTIRTVFTSRHKKFDEFFLELLDNSEKSLN
DMFVRTYGKLYTHNSEMFEDLFSELKRYYTGGNVNLEEVLNDFWSRLLERMFQLLNSQYT
FTDDYLECISKYTDQLKPFGDVPRKLKAQVTKAFIAARSFVQGLMVGREVANRVAKVNIS
PGCSKALTKMLFCPYCGGMPGLRPCANYCQNVMRGCLANQADLDPEWNLFIDAMLLVADR
LAGPFNIEAVMEPIDVKISEAIMTMQDNSIQVSSKVFQGCGHPKPAGMGRSARGISDVFN
SRFRPYSPEERPTTAAGTSLDRLRIVWRTMQHSVIDIKDKLRESKRFWSSLPDSICAEDT
VTDPDEEQCWNSHTKGRYFPEVVKEGLTNQLNNPEVEVDITRPDTFIRQQIMTLRVMTNK
LRNAYNGKDVYFQDSSDEESGSGSGSGFTTEPEVIHTEPPILEADRSDPQPTAGAAHRQK
PSLQLLVCVLGLTALVLCWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacacctgtcgtggttttcacttctttatcgcttctattgtcgctgtcgtgt
gctggagatgtaaaatcgcgcagctgcagcgatgtgcgccaggcgttcacgaccaaaggc
ttcagtctccataatgtgccacatcaggagatacaaggtgaacatctgcgggtttgttcc
caaggctacacctgctgcacttcagacatggaggacagactcggccagcagagcaaggtg
gatttcgagaaattagtggacgagagcagtcacaccatacggacagtatttacctccaga
cataaaaagtttgacgaattctttctggagttgctggacaactcggaaaagtcgctgaac
gacatgtttgtgcgcacatacggcaaactgtacacacacaactctgagatgttcgaggac
ctgttctccgagctcaagcgctactacaccgggggaaacgtgaaccttgaggaagttctg
aatgacttctggtcgagacttctggagcgcatgtttcagctgctgaactctcagtacacc
ttcactgacgactatctggagtgtatcagcaaatacaccgaccagttaaaaccctttgga
gatgttccgcgcaagctcaaggcccaggtcaccaaggcctttatcgcggctcgctcgttc
gttcaaggactcatggtgggtcgggaagtggccaacagagtggcgaaggtcaatatatct
ccaggatgcagtaaagcattgaccaaaatgttgttctgtccgtactgtggaggaatgcca
ggcctcagaccctgtgccaactactgccagaatgtgatgcggggctgcctggccaaccaa
gccgacctggacccagagtggaacctcttcatcgatgccatgctgctggtggctgacaga
ctcgcggggccctttaacatcgaggccgtcatggagccgatagatgtaaagatctctgag
gccatcatgaccatgcaggacaacagcatacaagtttcatccaaggtatttcaaggatgc
ggtcatcccaaaccagctggaatgggccgatctgcccgcgggatctcggatgtgttcaac
agtcgcttcagaccgtacagcccagaagagagacccaccacagcagccggcaccagcctg
gacagactgaggattgtctggaggacgatgcaacacagcgtgatcgacattaaggacaag
ctaagggagtcgaagaggttctggtcgtcgctgccagacagcatctgtgccgaggacacg
gtgactgacccagatgaggagcagtgctggaacagccacacaaagggaagatattttcct
gaagtcgtaaaagagggccttacgaaccagctcaataacccagaggtggaagtggacatc
acgagaccggacacgttcatcagacagcagatcatgaccctgagagtgatgaccaacaag
ctacgaaacgcctacaacggcaaagacgtctactttcaagactccagtgacgaggagagc
ggctcgggcagcggaagtggcttcacgacagaacctgaagtgatccacacggagcccccg
atattggaagcagacagaagcgacccgcaaccaacggcaggcgcagcccatcggcagaag
ccttcgctgcagttactagtgtgtgtcctgggcctcacagcactggtcctgtgctggaga
taa
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