Rhinichthys klamathensis goyatoka (western speckled dace): 130091142
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Entry
130091142 CDS
T09701
Symbol
shroom2a
Name
(RefSeq) protein Shroom2 isoform X1
KO
K18625
protein Shroom
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130091142 (shroom2a)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130091142 (shroom2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130091142
NCBI-ProteinID:
XP_056114824
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MDTINQYAGFPEGDHRIFYSSERSGSFDEHHGNGEGWKVVDVSLSGGAPWGFTLRGGLEH
SEPLLITKVEEGSKAATARLQAGDELININNISLTGFRQEAICLVKGSHKTLSLVVKRKM
KMVDIVAQKMPSESDVHMARNFLTKILRSSMRKNRFKGRNEPLSRPHSWHATKFNESHSE
AKTQSTPSPGWQTRYDASAFSSELSTDWEQTNLHRVSDQFSSLGSMDSLEHSSHPYPPGC
LSPSKSNNNSIEHLGGGKRDSAYSSFSTSSGTPDYTLSKSNAASTENMLYKINQWDSSGR
HSNGRHSQSINEGVRQDEKLGYLQHLSSTGSHEIPRPEEQPGTRHSSSGRVSIGPVWHVP
DMKKNMVSSTPPPTPPTRSDSFAATKVHEKGLITGTSEGLGVHAQLKPQVKALQKAGETY
ESAQRSHQVIETVLEGQRNFNLPSKNDSLNPCISSNVHHQYPNRMSSDKTYSLSTTDVRD
RHPSYAHVPHHHRQYSDEGTFHAQTRTVPALNPPFSGYFSSMQELPTNNHMQLNSQNQAR
RPAASLSGLFGVTSHHVTQGMTQVSLVRVDESKASVVSEMSHSGRDRMSIGSQGGTKDRY
FPPQSQDHDIDHKDNNASFKQSDNHNRIFSAPCNPLNMPDSTKPPELRGSQKQHYMSSAN
EHSGSYPHSKQPEHRRNAGHLHLKEYSQQPFPTKSESKICPQKTPMLYSLAHEHNEMDDC
QDEINSGSAQQEALDSQSGKQARRSDRFATTLRNEIQMRRAQLQKSQSAATLESPVEAVE
EAAVWKTTTPSSDGGFSSSYKDHLKEAQARVLQATSFRRKDLEPVLFEHPGTEGSTWKDT
PPLPSVSEIPPSKPTSGSNQVLRIGSRKRFSAEKKVRSFSEPDKIHEVGADEHSPMPDNA
VPLENRHRFFDATLKAAFSKPMPKQNLQISEDNRLSKPGGMHYSAKSDTAGRSNSESSTP
IEHHLIEGQDGPLSVKQQAMLEQQRLGTFAEYEAKWNTQRKTTEPRVSGRYHSADNILDT
GNEGQSKPTCVHERSRSSPSADFYGQKLAVQEKSADYSKPEKILSEQDKNSTSHWFYTPI
RFNEKGYSELVCKEKPEAPPSALTEDLEKKTLDPPSSHHKPALHFSDHSTQSEPSALSKN
KSSVLLPHLEKYKCPEGTLPPLSNFQEVQPGSQGGVLASLSPVNNQSSASVSAPVPWKGL
EHSKGPIREEELQQELVPPPFPPPPPPAVLPTQQTAGPTQPTMEGQRSPSPQFAPQRLTD
KPPVPVSIQDEAPGRMDRVKDENASVKKVPIKIVHSESNTGKESRQYLDLPSETPVSSQE
PGVTHLQSLGNPDQSYSLFCTYTRQKDQGPETRDADMGLLKDQGPQTNVNPVFYEQTSPS
LDQSNNGLSSHHLQSEDDEKRKELARDIMVKDKSLVDILDQSKMKTTMDLMEGIFPQGEL
LLEEAQQRRKAAPKQLSPRNSVEKKEDDSLVVATALGTNSTYYSTSAPKAELLIKMKDMQ
EQSEEHHSEEELEEDNESDLANKKHELIDSLSKKLQVLREAQESLQEDVQDNNALGEDVE
AIVQGVCKPNELDKFRMFVGDLDKVVNLLLSLSGRLARVENALNSLEEDASQDERRTLTE
KRKLLIRQHEDAKELKENLDRRERVVYDILASYLPEESMADYEHFVKMKSALIIEQRKLE
DKIKLGEEQLNGLMDSLPMDHRTTN
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcaaccaatacgccggctttcctgaaggagaccacaggatcttttacagt
tcagaaagatctgggagttttgatgaacatcacggtaatggtgagggatggaaagtggtg
gatgtgtcactctctgggggagcaccatgggggtttacccttagaggtggattggagcac
agtgaacctcttcttataaccaaggtggaagagggcagtaaggccgcaaccgcaagactg
caggctggagatgaactcatcaatatcaacaacatttctctcaccggctttagacaagag
gccatctgtctagtcaagggctcccacaagactctcagcttggtggtgaaaaggaaaatg
aaaatggtggatattgtagcacagaaaatgccatcagagagcgacgtgcatatggcccgg
aactttctcacgaagattttacgaagttccatgagaaagaaccgatttaaagggagaaat
gaacccttgagcagacctcactcctggcatgccaccaagttcaacgagagccactcagaa
gccaaaacccagtccacaccctcaccaggctggcaaacaagatatgatgcaagcgcattc
tcctctgaactctcaaccgactgggagcaaacaaatctacatagagtatctgatcagttc
agctctttggggagtatggacagcctagagcatagctctcatccttatccacctggctgt
ctttctccaagcaaatccaacaataacagcattgaacatttgggtggtggtaaacgagac
tctgcatacagctccttttctacaagctcaggaaccccagattacacactgtctaaaagt
aacgctgcatccactgaaaacatgctgtacaaaattaatcagtgggactcaagtggcagg
cacagcaatggcaggcatagccaaagcataaacgaaggagtacgacaagatgagaagctc
ggatacttgcagcatctctcaagtacaggtagccatgagatcccaagacccgaagaacag
ccaggcactcggcattcaagctctggaagagttagtattggacctgtctggcatgtccca
gatatgaagaaaaacatggtttcctctaccccacctcccactccaccgacacgcagtgat
agttttgcagccaccaaggttcatgagaagggtctgatcacaggcacctctgagggcctt
ggtgttcatgcccagttaaagcctcaggtgaaagcattacaaaaggctggagaaacctat
gaaagtgcacaaaggtctcaccaagtcatagagaccgttcttgagggtcaacgcaatttt
aacttgccatccaaaaatgattctttaaatccttgcatttcatccaatgtccatcatcag
tatcccaaccgtatgtcgtcagacaagacatactccctatcaaccacagatgtcagagat
agacatccatcttatgcccatgttccacaccatcatcgtcagtacagcgacgagggcact
ttccacgctcaaactaggacagtgccagcactgaatcctccattcagtggctactttagc
agtatgcaggagctgcccacaaacaaccacatgcaactcaacagccagaatcaagctaga
aggccagctgcatcacttagcggtctttttggagttacctcccaccatgtcactcagggt
atgacacaggtttctttagtgagagttgatgagtctaaagcttctgtagtctcagaaatg
tcacacagtggacgggacaggatgtccataggttctcaaggaggaactaaagaccgctat
ttccctcctcagtcacaggaccatgatatagatcataaggacaataatgcctccttcaaa
caaagtgacaaccacaatcgcattttctctgctccatgtaatcccttgaatatgcctgat
tcaacaaaacctcctgagctgagggggagccaaaagcaacactatatgtctagcgcaaat
gagcattctggtagttatccccatagtaagcaacctgagcacaggagaaatgctggccat
ctccatcttaaagaatactcacaacaaccttttcctactaaaagcgagtcaaagatatgt
ccccagaaaacacctatgctgtattctctggcccatgagcacaatgaaatggatgactgt
caagatgagatcaacagtggaagtgcacaacaggaagcccttgacagtcagagcggcaaa
caggcaagacggagtgaccgttttgccaccaccttgcgcaacgagatccagatgagaagg
gcccagcttcaaaagagtcaaagcgcggccactttagaaagtccggttgaagctgtagaa
gaggctgctgtctggaagactactactccttcctcagatggtggcttttctagctcttat
aaagaccatctgaaagaagctcaggccagagtcctccaggctacatcttttaggcgaaaa
gacctagagccagtattgtttgagcatccaggcactgagggttctacttggaaggacaca
cctccacttccaagtgtctctgagatcccacctagcaaacccacctcagggagtaatcag
gtgcttcgcattggtagccgcaagcggttttctgcagaaaagaaagttcggtctttttct
gagccagataaaattcacgaagtaggtgctgatgagcactcccctatgcctgacaatgct
gtacccttggaaaatcggcacagattcttcgatgcaacattaaaagcagctttctctaaa
cctatgccaaagcaaaacctgcagatatctgaagacaacagactgtccaaacctggaggc
atgcactattctgcaaagagtgacacggcagggcggagtaacagtgaaagctcaaccccc
attgaacaccaccttattgaaggtcaggatggccctctctcagtgaaacaacaagccatg
ctagaacaacagcgacttggtacctttgcagagtatgaagccaaatggaacacccagagg
aagacgaccgaaccaagggtctctggacgataccactctgctgataacatccttgataca
ggaaatgagggacaaagtaagcccacctgtgtgcatgaaagatctagatcctccccttct
gctgacttctatggacagaaacttgcagttcaagaaaagtcagctgactattccaaacct
gagaaaattctctccgaacaggataagaatagtacaagccactggttctatacacccatc
aggtttaatgaaaaaggatacagtgaactcgtatgcaaagagaaaccagaagcacctcct
tcagctttgactgaagacctggagaaaaagactttagatcctccatccagtcatcacaaa
cctgcactgcatttctctgaccatagcactcagagtgaaccatcagccctctccaaaaac
aagagctctgttctcttgccccatctggagaagtacaaatgccctgagggtacacttcct
cctcttagcaattttcaggaggtccagcctggatcacaaggaggagtcttggcctcactc
tctcctgtcaacaatcaaagctccgcctcagtttcagcccccgttccctggaaagggttg
gagcatagcaaagggccaatcagggaggaggagcttcaacaagagcttgtgcctcctccc
tttccacctcctccccctcccgctgtcctgcccacccaacaaaccgctggccctacccag
cccaccatggaggggcagcgttcgccctcgccccagtttgctccccagaggctgactgac
aagccccccgtccctgtctccatacaggatgaagctcctggaaggatggatagagttaaa
gatgagaacgcatcggtgaagaaagtgcctattaagattgtccattcagaaagtaacacc
ggaaaagaaagtcgacaatatctcgacctgcccagtgagacccctgtcagctcgcaagaa
cctggagtaactcatcttcagagcttggggaacccggatcagtcatactctctgttctgt
acctacaccaggcaaaaggaccaggggccagaaacaagagacgcagatatgggccttctg
aaagaccaggggccacaaaccaatgtgaacccggtattctatgagcagacaagcccttca
ttagatcaaagcaacaacggattgtcttcacatcacttgcagtcagaggacgacgaaaag
agaaaggagctggctagagacataatggtcaaggacaagtccctagtggacattttagac
cagagtaagatgaagaccactatggatctgatggagggtattttccctcagggagagctg
ctactggaggaggcccaacagcgcaggaaagctgcacctaaacagctctcccctcgtaac
tctgtggagaagaaagaagacgacagcctggtagtggctactgctttagggactaattca
acctactacagtacatctgcacccaaagcagagctgctgattaagatgaaggacatgcag
gaacagagtgaggaacaccactcagaagaggagttggaggaagacaatgaaagtgatctt
gccaacaagaagcatgagttgattgacagcctcagcaaaaagttgcaggtgctgagggaa
gctcaggagagtctacaggaggacgtgcaggacaacaacgctcttggggaagatgtggag
gccatcgtacaaggtgtctgcaagcccaatgaactcgacaagttccgcatgttcgtcggt
gatcttgataaagtggtcaaccttctgctgtctctgtctggacgtctggccagagtagag
aatgccctgaacagcctggaggaagatgcttcacaggacgagaggcgtactctgacagag
aaacgcaaactgctgatccgtcaacatgaggatgccaaggagctgaaggagaaccttgac
aggagagagcgtgtggtctacgacatcttggccagctacctaccagaggagagtatggct
gattatgagcactttgtgaaaatgaaatctgcccttattattgagcaacgcaagctcgag
gacaagattaaactgggggaggagcagctcaacggtctgatggacagtctcccaatggac
cacaggacaaccaactga
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