Rhinichthys klamathensis goyatoka (western speckled dace): 130091180
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Entry
130091180 CDS
T09701
Symbol
pcdh7b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03273
Virion - Lassa virus and SFTS virus
rkg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130091180 (pcdh7b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130091180 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130091180 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130091180 (pcdh7b)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130091180 (pcdh7b)
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Protocadherins
130091180 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
Ig_Cad99C_N
LYRIC
Mid2
MLANA
Motif
Other DBs
NCBI-GeneID:
130091180
NCBI-ProteinID:
XP_056114897
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MRTTGIVDYLRYCFLILQLLSQPAAKQVLRYRLAEEGPADVRVGNVAADLSIAAGMDVTY
TLESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSMIGPAQSWVDL
YEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDN
GESSVRRIGTSGSGSVDSHTGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDRE
QRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGAPILQ
LKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARD
RGQPPKTDKATVVINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSD
RDKGPNGIVTCTVVGDVPFQLKPASEVEGEMNKKKYFLHTSALLDYEAVQEYNVVIVAVD
SGSPSLSSNNSLIVKVGDMNDNPPVFSKSTMEVSFPENNAPGERVVTVLALDADSGKNAE
ISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLV
ADKNDNEPKFMQDVFTFYIPENRQPNSPVGMITVMDADKGQNADMSLYIEEEEDIFSIDN
NTGTIFSNMAFDREQKTTYSFRVKAVDGGDPPRSAIATVSLSVMDVNDNPPTVTFPMNSS
YTLLPPSSNIRTVVRTVSATDSDTGVNANLSYRIVGGNPFKLFEIDSWTGVISLVGKLEQ
KHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLSNATIVEAQVAKSLGTPLNADIAGDP
NYDLGKQRLSIAIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHD
KGKKPKKDKNKKKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGS
PDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSEYSS
QTINKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPYP
KTPMRGLRPMAVSVRQSIWKMEKKNIKNTRPLPDVAMTGKCTRECDEYGHSDACWMPVRT
SPERRPKATPPKLSTFMTSPGGSVPEQPGSQEALAVANGDPSHLLGDRNRNLLNKKMASS
SSSYDAFSSAGFSASQETSRPIEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaggactacgggcattgtggactatttaagatactgctttcttattctgcagctgctg
agtcagcccgcagccaagcaagtgctccggtaccgcttggctgaggagggtcctgccgat
gtccgggtaggcaatgtagccgcggacctcagcatcgcggctggcatggatgtgacttat
accttagaatccggttccgagtacttcaaaattgataacatgaccggagacctgagcacg
aacgagcggcggattgaccgcgaaaagctgccgcagtgtcaaatgatttttgatgagaac
gaatgttttatagatttcgaagtatccatgataggacccgcgcagagctgggttgatcta
tatgagggcaaagtgattattttagacataaacgacaacacgccgtctttcccctcacct
gttctcaccctctccgttgaggagaacagacccatcggcacactttatctcctgcccacg
gccaccgacagagatttcggtcggaatggaatagagcgatacgagttaattcaggacaac
ggcgagagctctgtcagacggatcgggacttccggctccggcagtgttgactctcacacg
ggcaagcggagattcgacgagggggcgagccgtagcagcgtctttgaacttcaagttgct
gacaccacagacggagagaagcagccgcagcttattatcaaaggggcactggacagagaa
cagcgcgactcctatgagctgactctgcgcgttagagacgggggcgaccccccacgctcc
tcccaagccattcttagggtaatgattacagatgttaatgataacaacccacgctttgag
aagagtgtttatgaggcagacctgccagaaaacagctccccaggtgcccccatactccag
ctaaaagcgggcgacactgatgttggcgtcaatggacagattgagtacgttttcggagca
gccacagagtcagtgcgacgactgcttcggctagatgagagcactggctggctcagtgtt
ttgcaccgaatcgaccgagaagacgtgagccagcttcgcttcacagtcatggcacgtgac
cgcggtcagcctcctaagactgacaaggcgacagtggtcatcaatatcaaagacgaaaat
gacaacgtccccaatatcgacatccgaaaaatcggacgcatttttctcaaagacggagtg
gctaatgtggcagaggatgtgattgtcgatacacccatcgctttagtccaagtgtcagac
cgagataaaggaccaaatggtatagtgacgtgcaccgtagtgggcgatgttccatttcag
cttaaacctgctagtgaggttgagggtgaaatgaataaaaagaagtactttctccatacg
tcagcactccttgattatgaagcagtgcaggagtataacgtggtcattgttgctgttgac
tctgggagccctagtctctctagcaacaattcattaatagtgaaagtgggggacatgaat
gacaatccaccagtttttagcaaaagcacaatggaagtttcatttcctgaaaacaatgct
ccaggtgagcgtgtcgtcactgtattggctttagatgcagacagcggcaaaaatgcagaa
atctcttactccctggactcctctgtgaacggaatattttccattgatgcagacaccggt
gacatccgtgtcaacaccatacttgacagggagcagacggaacgatatgagttcaaagtt
atcgccaaagacaaaggcatgcctgttctgcagggttcagccactgtggtagtcctggtg
gcggataaaaatgacaacgagccaaagttcatgcaggatgtgtttactttctacataccg
gaaaaccggcaacccaacagccccgttggtatgataacggtcatggatgccgacaaagga
caaaatgcagacatgagtctatacattgaggaagaagaggacattttctccattgacaac
aacacagggaccatcttctcaaacatggcatttgaccgtgagcaaaaaaccacatattcg
ttccgtgtcaaagctgttgatggaggtgatccgccccggtcagctatagccacggtgtct
ctctctgtaatggatgtaaatgacaatcctcccactgttacttttccaatgaatagctca
tacacactgcttcctccttctagcaatataaggacggtggtgaggactgtctcagctact
gattccgacacaggtgttaatgctaacctcagctacagaatagttggcggcaatccgttt
aagttgtttgaaattgactcttggactggagtaatctcattagtcggcaaactagagcaa
aaacactttggccttcatcgcctggttgtgcaagtgaatgacagtggggttccgtcgcaa
agcaccaccacactagtccacatctacgtcaatgaaacgctctctaacgccactattgta
gaggcacaagttgccaaaagtcttggtacaccgctcaatgctgacattgcaggagacccc
aattatgacttgggaaagcaacggctgagcattgccataggggttgtgtcaggcatcatg
actgtcattcttatcatcctggtggtcgtcatggcccgctactgccgtcccaagaacaag
aatggatatgaggctggaaagaaagaccatgaggatttcttcacacctcagcaacatgat
aaaggcaagaaacctaagaaagacaagaataagaaaaagtccaaacagcctttatatagc
agcattgttaccgtagaggcatccaagccaaatgggcagcgctatgatggcgttaatgag
aaactgtcagacagtccaggaatgggccgctatcggtctgtcaacggtggccccggaagc
ccagatcttgcccgccattacaaatccagctcacccttgcccactgttcagctgcacccg
cagtcgcccacagcgggaaaaaagcaccaggctgttcaggacctgccgccggccaacaca
tttgtcggcactggagataacatatccatcggatcagaccactgttctgagtacagtagc
caaaccatcaacaagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagc
cagccccaggacccgcaccagggctcgctgcagagctgctacgacagtggcctggaggag
tcggagacgcccagcagcaagagctcgtccggccccagactaggtgccctcccttacccg
aagacgcctatgagaggactacgcccgatggcagtgtcggtgaggcagagcatatggaaa
atggagaaaaagaacattaaaaacactcggcccctgcctgacgtagccatgacgggtaaa
tgcacgcgggagtgtgacgaatacggccactcggatgcctgctggatgcctgtgcgcacc
tcgcctgaacgtaggcccaaggccacccctcccaaactctccaccttcatgacctccccc
gggggcagcgttcccgaacagcccggcagccaggaggcgctagctgttgccaacggcgac
ccctcgcacctgctgggcgaccgtaaccgtaatctccttaacaagaagatggcctcctcc
tcctcatcctacgacgcgtttagctcagctggattttccgccagccaggaaacatctcgc
cccatcgaggagattccgctagcgcccacaggtgaatacaagccgacgcaatgcggaact
ctcaccaggcgggaagtttacctgtaa
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integrated database retrieval system
