KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130091182
Entry
130091182         CDS       T09701                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130091182 (per1b)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    130091182 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 130091182
NCBI-ProteinID: XP_056114899
LinkDB
Position
Unknown
AA seq 1404 aa
MSDDNSDSAPSNDSARGARVEKKAGLENRSCCMSESSPSSNPVNSETGSSPGGLSDAKRS
PGGNRGTNSDDTDGLSSGNDSGERESEGGMERGSGSRGRQSNRSYQSSSSQNGKDSAMGL
ETTESNKSSNSHSSSPPSSSLAYSLLSASSEQDPPSTSGCSSNQSARVQTQKELMRALNE
LKIRLPPERKMKGRSSTLNALKYALSCVRQVRANQEYYHQWNVEECHGCSLDLSTFTVEE
LDNITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRSKPEKLHGVLFSELLAPQDVS
TFYSNTAPCRLPSWASCIGSASPPADCTQEKSMFCRISGDVSSSGDVKYYPFRLTPYLLT
LRDSDMAYPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPLLGYL
PQDLVGTPVLLYLHPEDRPIMVAIHKKILQFAGQPFEHSPLRMCARNGEYLTIDTSWSSF
INPWSRKVAFIVGRHKVRTSPLNEDVFTPPRGQEERTLSPDIPQLSEQIHRLLVQPVHNG
SSQGYSSLASNGSHEHQPSATSSSESSGPCLKDPSQFHKPMTFQQICKDVHMVKASGQQV
FIESRNRPPPKKHTTAGALKAVEAAQLGSRLCPSAAPPSKSSAPSLIVPKEPPSTYSYQQ
INCLDSIIRYLDSCNIPNTVKRKCGSSSCTASSTSDDDKQQDAPRNAKGPSVSLVKESAL
LPPLAMHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPPTPNAAATQPQAPPT
ATPTLPPSPAPDRDAGRRGGLGGAGGERLGLTKEVLSAHTQQEEHNFMYRFRDLSELRVF
DPASALRQQATTPLARGVRSSRDYPAAGSTGRRRGRGGKRLKHQESSEHTRSRSPAGQIR
GLRPGVPALDRPSNSSIPMGPVASSSSWPTSGSQASAHSVPYPPGVLPLFPVYPPFSHPV
SDPSIQAGLRFPLQNSQLPMQMAGAPMVPPMMALVFPNYMFPQPFYSPNPAFPFPAANMT
SPAPCQIPTPVPRALSRSSTPHSISQREAGAEREGAESPLFQSRCSSPLNLLQLEESPSN
RLEVASALASVQQTTSPMVGQGGGTGGGQNPSNQRGLALDSKENENGEQNDSNQDAMSTS
SDLLDLLLQEDSRSGTGSAASGSRSSGTGFSGSSGSGSNGCSSSGSGTRSSQSSNTSKYF
GSVDSSENSHSRKQTAEGDGEAQFIKCVLQDPIWLLMANTDEKTMMTYQLPIRDRDSVLK
ADRAALRAMQKQQPRFTEEQKSELSQVHPWIRTGRVPRALNISACVGCKSSPSVPSATPF
DVEIHEMEFCSVLECSAEKHTQADTAMEKSEAEGEDESCKDQEVENDRTIMTSQINDQEM
MIEEQGVTSQIEEEMGASLSQMTH
NT seq 4215 nt   +upstreamnt  +downstreamnt
atgagcgatgataactccgactccgcgcccagcaatgattcagctagaggagcaagagta
gagaaaaaggcagggcttgaaaacagatcctgctgcatgagtgagagctctccctcatcg
aatccggtgaatagcgagacagggtcatctccgggagggctatctgatgccaagagatcc
ccaggtggcaaccgtgggacaaattccgatgatacggatggactatcaagtggaaatgac
tctggggagagggaaagtgaaggagggatggagagagggagcggatccagagggaggcag
tcaaaccgaagttatcagagttcctccagtcagaacggaaaagactcggccatgggtctg
gagactacggagagcaacaagagctcaaactctcacagctcttctccacccagcagctct
ctggcttacagcttgctgagcgccagctccgagcaagatccgccgtccaccagcggctgc
agcagtaatcagtccgctcgtgtccagacacagaaagagctgatgagagccctgaatgag
ctgaagatccgtctgccaccagagaggaagatgaagggacgctccagcacccttaatgcc
ctcaaatacgccctcagctgtgtcagacaagtcagagccaaccaggagtattatcaccag
tggaatgttgaggagtgtcatggctgtagtctcgacctctccaccttcactgtagaagaa
ctggacaacatcacctctgaatacacactcaaaaatacagacacattttccatggcggtg
tctttcctgtcagggaaggttgtgtacatctcaccgcagggatcatctcttctgcgcagt
aagccagagaagctgcacggggttttgttttcagagctgctcgccccccaagatgtgagc
accttctacagcaacaccgcaccctgcaggctgccatcatgggcctcctgcatcggctct
gcctctccaccagctgactgcacccaagagaagtccatgttttgtcgcatcagtggagac
gtctcatccagtggtgatgtaaagtactacccgttcagactgaccccctacctgctcacg
ctccgagactctgacatggcttaccctcaaccctgctgtctgcttattgcagagagagta
cactcgggatatgaggcccctcgcattcctccggataagaggatattcactaccagtcac
acccccagctgtctctttcaggaggtggatgagcgggcagttcctcttttagggtacctg
cctcaggacctggtgggaaccccagtcctgctgtacctccatccagaggacaggcccatt
atggtggccatccataagaagattctccagtttgcagggcagccgtttgaacactcaccc
ttgcggatgtgtgcacgtaacggagagtatctgaccatagacacctcttggtcctccttt
attaacccctggagcaggaaagtggccttcattgttggacgccacaaagtcagaacctct
ccactgaatgaggatgtctttacgccgccgaggggtcaggaggagcggaccctgtcccca
gacatacctcagctcagtgagcagatccacaggcttctggtgcagcccgtccacaacggc
agctctcagggctacagcagcctggccagcaatggatcccacgagcaccagcccagtgcc
acctcctcatcagaaagcagtgggccgtgtctaaaggacccctcgcagttccacaaacca
atgaccttccagcaaatctgcaaagatgttcacatggtgaaggccagcggacaacaagtc
ttcattgaatcccgcaaccgacctcctcctaaaaaacacaccaccgcaggtgctttgaaa
gcagttgaagcggcacagctgggcagcagactctgtcctagtgctgctccaccctccaag
agctccgcaccctccctgatcgtcccgaaggagccgccctccacctactcttatcagcaa
atcaactgcttggatagtatcataaggtatctggacagctgtaacatcccgaacacggtg
aagaggaagtgtggctcctcttcctgcactgcctcctccacatctgatgatgacaaacag
caggacgctccacgcaatgctaaaggtccatctgtgtctctggtaaaggagagtgcattg
ttacccccactggccatgcacagtaaagcggaaagtgttgcgtctgtcacctcccagtgt
agtttcagcagcaccatcgtccatgtgggagacaaaaaacctcccgagtcagatatcgta
atggaggaagcccctcccactccgaatgctgctgccactcaaccacaagcccctcccaca
gccacacctactctgccccctagtcctgctcctgatagggatgcaggaagaagaggaggt
ctaggaggagcaggaggagaaaggttgggtctcacgaaagaagtcctgtcggctcacaca
cagcaagaggagcataacttcatgtaccgcttcagagacttgagcgaactcagagtgttt
gacccagcctcggctttgcgccagcaagcgaccacacccctagcaagaggtgtgcgcagc
tctcgggattacccagcagcaggtagcactgggcgtagacgcggtcgaggaggcaaaaga
ctgaagcaccaggaatcttcagagcacacgaggtcccgtagcccagccggccaaataaga
ggcctccgtcctggggttccagctttggacaggccctctaattcctccatacccatggga
cctgtagccagttcctcttcctggcccacgtcaggttcacaagctagcgctcactctgtc
ccgtaccctcccggcgtccttccattatttcctgtctatccccccttctcccatcccgtc
tcagaccccagcatacaggcggggctacgcttcccccttcagaactcgcagttgccgatg
cagatggcgggggctcctatggtgcccccgatgatggcattggtatttcccaactacatg
tttcctcagcccttctacagcccaaacccggctttccctttccccgctgccaacatgacg
tcccctgctccctgtcagattccgactccagtcccacgcgccctctctcgctccagcacc
cctcattccatcagccaaagagaggccggcgctgagagagaaggagcagagtctccgctc
tttcagtccagatgctcctcacccttaaatctgctgcagctggaggagtcgccaagcaac
cggttagaggtagcatcagctttggcgtcagtgcaacagaccacatctcctatggtggga
cagggaggtggaacaggaggaggacagaacccctctaatcagagaggtttagcgttggat
tcaaaagaaaatgaaaatggtgaacaaaatgattccaatcaagacgccatgtccacctcc
agtgatctgctggacctgctgttacaggaggactctcgctcaggcactggctcagccgcc
tcaggctcaaggtcatcaggcacaggcttctctgggtcctctggatcagggtccaatggc
tgcagctcttctggaagtggaactagaagcagtcagagcagcaatacaagcaagtacttt
ggtagtgtggactcatccgaaaacagccattcccgcaagcagacagcagagggggatgga
gaggcacagttcatcaaatgtgtcctacaagatcccatctggctcctcatggccaacacg
gatgaaaagactatgatgacctaccagctgcccatccgagacagagattctgtgttgaaa
gcggaccgtgctgctctgagagccatgcagaaacagcagcctcgcttcactgaagagcag
aagagcgaattgagtcaagttcacccttggatccgcactggacgcgtgcctcgtgctctc
aacatttctgcatgtgtgggctgcaagtcctctccttcggtgccctctgcgacccccttc
gatgtggagatccacgaaatggagttctgcagtgttttagagtgcagtgctgagaaacac
acccaagcagacacggccatggagaagagcgaggctgagggagaagatgagtcatgcaaa
gaccaggaggttgagaatgataggactattatgacgtcacaaatcaatgaccaagaaatg
atgatagaagaacaaggagtaacctcacagatcgaggaggaaatgggtgcctcactttca
cagatgacacactaa

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