KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130091521
Entry
130091521         CDS       T09701                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
  KO
K10602  E3 ubiquitin-protein ligase NHLRC1 [EC:2.3.2.27]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130091521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130091521
Enzymes [BR:rkg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130091521
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130091521
SSDB
Motif
Pfam: NHL zf-RING_UBOX zf-RING_5 zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_4 zf-C3HC4 Peptidase_M16_C zf-C3HC4_2 Prok-RING_4
Other DBs
NCBI-GeneID: 130091521
NCBI-ProteinID: XP_056115428
LinkDB
Position
Unknown
AA seq 401 aa
MSETAVQPHIRAEDILAEIRANLLECKVCFEKFSIQKRDHTPRNLPCGHVLCLKCICALS
HPENQRLECPFCRKPWDVGSTSECYALTDLQELLLSEACPRLYDRVIGWTESLGSGTLHL
RSAFGGWGTIVNPSGMVVSETSGQIVLVHDGEKRVAVFDAQGTRLDGFGRYGHNPSDLCH
PLDVALTKCGHVLVTDAGDQSVKVFTSKGHPVATIRDSFRLPWGVDVDARGCVFVTDAEM
GTLSQIVIDFPRGVVLVNRVVFKELACPRSVASCKASGNIAVVERFQAGFTASCLRIFNS
DFVPLTQVDSFALNLKNSLRLSISSVVFDINGDVIVGDSQNGMVWSLGKPQKTPALTPLV
SGLLRPVALATTTMNVLVVLDGGDHAVKFYAADKDDLYCEK
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtccgagacagccgtccaaccacatataagagcggaagacatcctagcagagattcga
gcaaacctgctggagtgcaaagtgtgttttgagaagttctccattcagaaacgagaccac
acgccccgaaatcttccctgtggccacgtgctgtgtctcaaatgcatctgtgcactttcc
caccctgaaaaccagaggctggagtgtcctttctgtaggaaaccgtgggatgtgggcagc
acctctgaatgctatgcgctcaccgatctccaggagcttctgctgtcagaagcttgtccc
cggttgtatgatcgagtcataggatggaccgaaagcttgggatctgggacgctgcatctc
cgttcagcttttggaggatggggaacaattgtgaacccttctgggatggttgtttctgag
acatctgggcagattgttttggtgcacgatggtgagaaaagagttgccgtttttgacgct
caaggaactcgtttggatggcttcggacgttacggacacaacccgtctgatttatgtcac
ccacttgatgttgcactcaccaaatgtggacatgttttggtcacagatgctggtgaccaa
tcagtcaaagtcttcacttccaaaggccatccggttgcaaccatccgagactcttttagg
ctgccatggggtgttgatgtagacgcccgtggatgtgtttttgtgaccgacgctgagatg
ggaacacttagccaaatcgtaatagactttcctcgtggggtagtcctagttaacagagtg
gttttcaaagaacttgcatgtccgcgttcagtagcttcttgcaaagcatcgggaaacatc
gcagttgtggaacgttttcaggccggattcacggcttcatgtttgagaatattcaatagt
gactttgttcctttgacgcaggtggacagttttgctcttaacttgaagaactctctgaga
ttgtctatatcttcagtggtttttgatataaatggagatgtgattgtaggggattctcag
aatgggatggtctggagtttgggaaagccgcagaaaacacctgcactgactccactagtg
agcggactgctgcgtccagtggcattggctacgactacaatgaatgtgcttgtggttctg
gacggaggagatcatgcagtcaagttctacgctgcggacaaagatgacttgtactgtgag
aaatga

DBGET integrated database retrieval system