Rhinichthys klamathensis goyatoka (western speckled dace): 130091525
Help
Entry
130091525 CDS
T09701
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04621
NOD-like receptor signaling pathway
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130091525 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130091525 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130091525 (nod1)
Pattern recognition receptors [BR:
rkg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130091525 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_22
NPHP3_N
NTPase_1
SLFN-g3_helicase
AAA_30
AAA_18
PIF1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
130091525
NCBI-ProteinID:
XP_056115435
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MGSYKKGSHLNLLTLHRELLVEQVKNTQCILDNLQINGFICTEDIEIIQRSTTKTDQVRK
ILELVQSKGEECSAYFMHILHEAYDAYIDLRPWFDDIQYTPLDTISAIPVINTDPISKYC
EKLRCELGRDTQFITSYSKSEETPLEDLYMDTQMELLNDRGESLGYLQSLDELLGDQGVF
NQQAETIFITGDAGVGKSIVLQKLQNLWSQRELKTRAKFFFKFRCRMFSAFKETDEISLK
DLIFKHNCYPDGDLDNEVFTYILRFPETVVFTFDGYDEIQMDSDLDNVPEVVSPEEKTRP
LLLLMNLLCGKLLKGSRKILSARSGTEIQSRVIRKKVYLKGFSPEHLKRYTALHFPEMEH
RTLVTDQLDANPHLCGLCSIPLFSWIILKSFKHLHSVYDNFELPDSCITLTNVFLLLSEV
FLGHSTARPGLLKRSPRCPTDTFKAGEQKLSAFARLALQGLERGGLVFSIEEVTSCGLDD
EDLQFGFLRPASHYDACGGSATFEFLHETLQAFLAAFSLVLDSKISPESILRFFSKCEYK
KKSHLSCLPCLGKSRPRDKDPFQTNFQFTNLFLCGLLSKPNAALLEHIVPPASLNQKRKM
LKSYLSNSVRTHLKGLPRYPSTDIEGYKVHAMPNFLWMLRCIFETNSENVAKMTANSISA
DYIKIAFCNIYSADCSALNFVLHHRKKHLGVDMDNNNINDYGVKQLRPSFSKMTVVRFCV
NELTDSSIEVLAEELVRHKIIKVLGLYKNHITDVGAKLVAKIIEECPHLKTVKLGCNNIT
GVGGKYLASAIHKSKSIFDIGMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSFGG
RSLAKALKQNTSLHIFWLIQNKISDDAASDIADAFKSNSALTHLMLMENELTIHGAKQLS
EGLTNNTTLKEVNIKGNCVSEEEEQLFEGDKRLRFH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttacaagaaggggtctcacctgaatctgctgactttacaccgcgagctgctg
gtggagcaggtgaagaacacgcagtgtattctggacaatctccagatcaacggcttcatc
tgcactgaagacatcgagatcatacagcgcagcaccaccaaaactgaccaggtacggaaa
attttggagctggttcagagtaaaggagaggagtgctcagcatatttcatgcatattctt
catgaagcatacgatgcttacattgatctgcggccttggtttgatgatattcagtacacg
ccattagacactattagtgccataccagtgattaacacagacccaattagcaagtactgt
gagaagctcaggtgtgagctgggaagggacactcagttcatcacgtcctactctaaaagt
gaggagacgccgctggaggatctttacatggacacacagatggagctcctgaacgacaga
ggtgagagcttgggatacttacagagtctggatgagctactaggagaccagggtgtcttc
aaccagcaggctgagacgatcttcatcactggtgacgctggcgtaggcaaatcaattgtc
cttcagaaactgcagaacttgtggtcccaaagggagctgaagacgcgtgcaaagttcttc
ttcaagttcagatgcaggatgttcagtgccttcaaggagacggacgagatctcgctgaag
gatctgattttcaaacacaactgctatccagacggagaccttgataatgaggttttcact
tacatcttacgattcccagagacggtggttttcacctttgatggatatgacgaaatccaa
atggattccgacttggataatgtgcctgaagtggtctctccggaagaaaagactcgtccg
cttctgcttctcatgaatttgctttgcggaaaattgctcaaaggttctcggaagattcta
tcggcacgaagcggcactgagatccaaagcagagtaatccggaagaaggtgtatttgaag
ggattttcacctgaacacctgaagagatatacagctctccatttcccagagatggaacac
aggacattggtgacggatcagctggacgccaaccctcacctctgcggtctttgctccatc
ccgttgttcagctggatcatcctcaagagcttcaagcatcttcattcggtttatgataac
ttcgaattgccagactcttgcatcacgctcacaaatgtcttcttgctcctttctgaggtc
tttcttggccactcaactgcacggcctggtcttttgaaacggagcccgaggtgtcccacg
gacacctttaaagctggtgagcagaagctttcggccttcgctcggctagccttacagggt
ttggaaaggggtggacttgtcttcagtatagaggaagtgacatcctgtggattggacgac
gaagaccttcagtttggctttctgaggcctgcttcacattacgatgcatgcggaggctct
gctacctttgagttcctccatgagacgctccaagccttcttagcagctttttctctggtg
ctggactccaaaatctctcctgaatccattctaaggttcttctccaaatgcgaatataag
aagaagtctcatctctcctgcttgccttgtctgggaaagtcaagacccagagataaagac
ccgttccagaccaatttccaattcaccaacttatttttatgtggtctcttgtccaaaccc
aacgctgcactcctagagcatatcgttccaccggcatcattgaaccaaaagcgcaagatg
ctcaagtcctatctgtccaacagcgtgcggactcatcttaagggcctccctcgttatcca
tctacagacattgagggctacaaggtgcacgcgatgccaaatttcttgtggatgctgcga
tgcatttttgagacgaacagcgagaatgtggccaagatgacggccaacagcatatcggca
gattacattaagattgccttctgtaacatttactcggccgactgcagcgcgttgaacttt
gtcctccaccaccgtaagaagcatctgggagtcgacatggacaacaataacatcaatgat
tatggtgtgaagcagcttaggccctctttcagcaaaatgacggtggtaagattttgtgtg
aatgagctcacagacagcagtattgaagttctggcagaggaactcgtcagacacaaaatc
attaaggtcttgggcctttacaaaaaccacatcacggatgttggagccaaactagtagca
aagatcattgaagaatgtccacacttgaagactgtcaagctcggctgcaacaacatcaca
ggtgtgggtgggaaataccttgccagtgcaattcacaagagcaaatctatctttgacata
ggaatgtggggtaactcgatcggtgacgagggggcagatgcgtttgcagaggctttgaag
aatcaccccagcctgaccaacctcagtctctccgccaatggcattacttctttcggtgga
agaagtctggcaaaagcactgaagcaaaacacaagccttcacatcttctggctgatacag
aacaaaatctctgacgatgcagcgtcagacattgccgacgccttcaagtccaactctgct
ctgacacatctgatgctaatggaaaacgagttgaccattcacggagccaaacagctgtct
gaaggcttgacaaacaacactacactgaaggaagtcaacattaaaggaaactgtgtttct
gaagaagaagaacaactctttgagggcgacaagaggcttcgcttccactaa
DBGET
integrated database retrieval system
