KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130091526
Entry
130091526         CDS       T09701                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130091526 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130091526 (xrcc1)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     130091526 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 130091526
NCBI-ProteinID: XP_056115436
LinkDB
Position
Unknown
AA seq 611 aa
MPEIKLKHIVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGSNTNRVRFFGPNQLVKATA
QEKWDCVKVVCSQPYSKSIAYGITFIKLHSPPDGNDVPITTPPKLTKLGQFRVKDESPSS
GSNIQPGSLFFSRESTGKSSTGLKVSPQNDRLSYATAALKSDGSSTQSSSSTQQTPVKRK
FEFSKERLEATGPPPKKPSSSASSEPNSTTPKSKARTSATASPITTGQKTPDKRESPKSK
PEPKPKPKPKPKSAEPVAFNRIMEGVVFVLSGFQNPFRGELRDKALAMGGRYKPDWTSDS
THLICAFANTPKYSQVKAAGGIIIRKEWVMDCHKTKQKLSFKRYLMDGAESSSESEAEQD
ESEEETQKTKTPEKRHVTPKKQPIKEEEDYGGSTDAEGPEDDVSGMDTEDELNRVEMESR
KKKAAKESPGKVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLKGKRFYLYGKFPDNQKR
QLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEDALMENGSLSFVKPSWIFAINDRQK
MLPYQPYTVVP
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaacttaagcatatcgtgtcttgcagcagtgaggacaatactcacaag
gcagacaacctcttgagctctgacacgtacagaaaatggaaagctgcaagacctggagag
aagcaagtttcagtcattcttcaattggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacgtcagtcaaagat
caagactttgaggttctgttggtcacgtcatccttcatgtcacccacagagagccgtaac
ggctcaaacacgaaccgagtgcgcttcttcggacccaaccagctggtgaaggccacggcg
caggagaagtgggactgcgtgaaggttgtgtgcagtcagccttacagcaagtcgatagca
tatggaatcacctttataaagctgcattctcctccagacggtaatgatgttcccatcacg
actccaccgaaactaactaaactgggtcagttccgtgttaaagacgaatccccttcttct
ggttcaaatatccagccgggaagtctgttctttagcagagagagcactggtaaatccagc
acaggactgaaagtgtctcctcagaatgacaggttgagttacgccactgctgctctgaaa
tccgacggttcgtccacacagtcgtcttccagcacacaacagactcctgtgaagaggaag
ttcgagttcagtaaagagcgtctggaagccaccggtccaccgcccaaaaagcccagttca
tctgcctcttctgaaccaaactctaccactccaaaatctaaagcaagaactagtgcaact
gcaagtcccatcaccaccggccaaaagacaccagacaagagggagagtcctaaatccaag
ccagagcccaagccaaaacccaaacctaagcccaagtcagcagaaccggttgctttcaac
cgcatcatggagggagtcgtctttgtcctgagtggcttccagaaccccttccgcggagag
ctgcgggacaaagccctggctatgggaggccgatacaaacccgactggacttcagactcc
acacacctcatctgtgcgtttgccaacacacccaagtacagtcaggtgaaagcagctgga
ggcattatcatcaggaaagagtgggtgatggactgtcacaaaacaaagcagaagctttcc
ttcaaacggtatctcatggatggagccgagtccagttcagagagtgaagcagaacaggat
gagagtgaggaggaaacgcagaaaacgaaaacaccagaaaagaggcatgtgacccccaaa
aagcagccgattaaggaagaagaagactatggtggctcaacggatgcggaaggcccagag
gatgacgtgtctggcatggacactgaagatgagctgaacagggtggagatggagagcagg
aagaaaaaagcagcaaaggagagcccaggaaaggtgaaggatgaagatccgtacggcggc
tctacagatgagaacacggatgcggaggaagaggaggataaacccatccctgagctgcca
gacttcctaaaagggaagcgcttctatctctacggcaagttccctgacaaccagaaaagg
caacttcagcgctacatcatcgcctttaacggagctgttgaagactatatgagcgagaag
gtccagtttgtcatcaccagcgagggatgggacgaatcttttgaggatgccttgatggaa
aatggaagtctgagctttgtgaagccgtcctggattttcgccatcaatgacaggcagaag
atgttaccgtaccagccctacactgtagtcccttaa

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