Rhinichthys klamathensis goyatoka (western speckled dace): 130091527
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Entry
130091527 CDS
T09701
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130091527 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130091527 (prpf38a)
Spliceosome [BR:
rkg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130091527 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
130091527 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130091527
NCBI-ProteinID:
XP_056115441
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDDEEEKPERVQTPEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRDRDRDRHRKSKSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSK
SPESRSKKSHKRSRREKE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagaacggtaaaagatgccaatagtatacatggaacaaatccccagtatctt
gtcgagaagattatacggacacgcatatatgagtccaagtactggaaagaggaatgcttt
ggacttacagctgagcttgtcgtggacaaagcaatggagctaaagtttgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgacactaaagatgctgcagatt
cagcctgaaaaggacatcattgtggaattcatcaagaatgaggacttcaagtatgtccgt
ttgcttggagcgatgtatatgcgcctgactggaacttctgtggattgctacaagtattta
gaaccattatacaatgactacaggaaaatcaaaagccagaatagaaatggagagtttgag
ttgatgcatgtcgatgagttcatagatgagcttcttcatgcagagcggatgtgtgacatc
atccttccaagacttcagaagagacaggttttggaggaagctgagctactggatactcgt
attagtgccctggaagaagacctggatgaggtggagaccagtgaagaggaggatgatgaa
gaagagaagccagagagagtgcagacaccagagccacacagaagaagttacagagatatg
gaccggccacgcaggtctccatctccacgctacagacgcagccgctcacccagaagacgg
agcagatcacctaaaagacgaagcccatcacccagacgtgatcgcgaccgggaccgggac
cgccaccgcaaaagcaaaagcaaaagtccccgtagacaccgcagcagatccagggaccga
aggcatcgctccaaatctccaggtcaccacagaagtcaccggcatcgcagtcactccaag
tccccagaaagtcggtcgaagaagagtcacaagagaagtcgaagagaaaaagagtga
DBGET
integrated database retrieval system
