Rhinichthys klamathensis goyatoka (western speckled dace): 130091564
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Entry
130091564 CDS
T09701
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130091564 (mex3a)
04121 Ubiquitin system [BR:
rkg04121
]
130091564 (mex3a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130091564 (mex3a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130091564 (mex3a)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130091564 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
zf-C3HC4
IATP
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130091564
NCBI-ProteinID:
XP_056115482
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MPSLLVLAGIMEKNGGYGGDLAGSGFGSEGLLVPPEEEEDDSRALRVALGQLSLLGLGEG
EDGAPAGGGGGGVQDRSNNNHHNHIPSESGMLQGKNKLCALYESSPTETKGRGCNITECV
PVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARREIISA
AEHFSMLRASRNKLGVSFSGSPPAPLPGQTTIQVRVPYRVVGLVVGPKGSTIKRIQQQTC
TYIVTPSRDRDPVFEITGSPGNAERAREEIEAHIAFRTGGLHDHNNENDCLGPDSGNGGL
ESRLQQVWGLQGAPRKPLASSYRQNFSDTMVGSSGGGGGGGGIYSKGDFTNHGNGDKPCS
YFGSEGTQSWGDPDYPKQVAYYAQQRSKSFGGLPLPLTRLSPGLPEPCGTNNSNAVGSPH
AQARRAHSEPTATTVTFTGRLPVPDSPPAVARDCMTCFESKVTAALVPCGHNLFCMECAI
RICELNHPECPVCHTLVTQAIRIFS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcttgctggttctagcagggatcatggagaaaaatgggggctacggcggggat
ttagccggctccgggttcggtagcgagggtctcctagtgccgcccgaggaggaggaggat
gattcccgtgcccttagagttgcgctgggccaactgtcgctgctgggtcttggagagggc
gaggacggggctcctgcgggtggtggtggtggaggagttcaagacaggagtaacaataac
caccacaatcacatcccatctgaatcagggatgttacaagggaagaataagttgtgcgcc
ctgtacgagagctcgccgaccgaaaccaaaggacggggctgcaacataacggagtgcgtc
cccgtgccaagctccgaacatgtggccgaaatagtggggaggcaaggttgcaaaatcaaa
gctttgcgtgccaagacgaacacctacatcaagacccccgtcagaggcgaagaaccagtc
ttcctcatcaccggccgcaaagaggacgtggccctggccagacgtgaaatcatctctgct
gcagagcacttctccatgctgcgggcctccaggaacaagctgggcgtctcgttcagcggc
tcgccgcctgcaccgctccctggccagaccaccatacaggtgcgggtgccctaccgcgtc
gtgggtttggtggtcggacccaaaggctccactataaaacgcatccagcagcaaacgtgc
acttacatcgtaaccccgagccgcgaccgcgaccccgtcttcgagatcaccggctcccct
gggaacgccgaacgggctcgggaggaaatcgaggcgcacattgctttccgcacgggtggc
ctgcacgaccacaacaatgagaacgactgcttgggccctgacagtggcaacgggggtctg
gagagccgcctgcagcaggtgtgggggctccagggggccccgcgcaaaccgcttgccagc
agctaccgccagaatttctcagacaccatggtcggaagtagcggaggaggaggaggaggg
ggagggatttacagtaaaggtgactttaccaaccacggcaacggggacaagccgtgctct
tacttcggctcggagggcactcaaagctggggcgatcccgactatcccaaacaggtggcc
tactatgcccagcagcgctccaaaagctttggaggcctgcctctccctctgaccagactg
tcgccgggactgcccgaaccgtgcggcaccaacaactccaacgccgtagggtctcctcac
gcccaggcccgccgtgcccacagcgagcccaccgccaccacggtcacgttcaccggacgg
ctccccgtgccggattcaccgcctgccgtggctcgggactgcatgacctgctttgagagc
aaagtgacggccgctctggtcccgtgcggtcataacctcttctgcatggagtgcgccatc
cgaatttgtgagctaaaccatccagagtgccctgtctgccacaccctggtcacacaggct
atccgaatattctcttaa
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