Rhinichthys klamathensis goyatoka (western speckled dace): 130091646
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Entry
130091646 CDS
T09701
Symbol
bgna
Name
(RefSeq) biglycan a
KO
K08118
biglycan
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130091646 (bgna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130091646 (bgna)
Proteoglycans [BR:
rkg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
130091646 (bgna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130091646
NCBI-ProteinID:
XP_056115626
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MLSVCVAFLFLCTAHLPLDSSALPFEQKGFWDFGKDIDVKELMMMMKDQEEGSAVDPYQP
EHPTCPFGCRCDRRVVQCSDLGLGYVPYDIPSDTLLLDLQSNRITEIREGDFKGLTNLYA
LVLRYNQISKVHPKAFLPLKRLQKLYISHNLLTSIPKNLPPSLVELRIHDNHIKKVPAFS
FSGLHNMHVIEMGRNPLQNSGFEPGAFMGLKLNYLRISEAKLTGVPKDLPSSLHELHLDN
NQIQAIEFVDLSQYASLQRLGLGSNQIRHIEHGALSYLTNLRELHLDNNRLPGVPSGLPQ
MKYLQVVYLHSNNITNVGVDDFCPTGFGMKRVFYNGISLFDNPIRYWEVQPAAFRCVSDQ
MAVQFGNHKK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctgtctgtgtggctttcctgtttctctgcactgcccacctgccactagactcc
tccgcccttccctttgagcagaaaggattctgggactttggcaaggacattgatgtgaaa
gagctgatgatgatgatgaaggaccaggaggaagggtcagctgtggatccataccaacct
gaacatcccacatgcccgtttggctgtcggtgcgaccgcagagtcgtacagtgctcggat
ttagggttaggttacgtgccatacgatattccttcagacacactgctgttggacctgcag
agcaacaggatcacagagattagagagggagactttaagggactgaccaacctctatgcc
ctggtgttaagatataaccaaatctccaaagttcatcccaaggcattccttcctttgaag
cgtttgcagaagttatacatctcgcacaaccttctgacttccatccccaaaaacctgcct
ccatcccttgtggagctgcgtatccatgacaatcacatcaagaaggtgccggcatttagc
ttctcaggcctccacaacatgcatgtcattgaaatgggtcgtaatccactccagaacagt
ggtttcgaacctggagcatttatgggccttaaactgaactacttgcgcatttctgaagcc
aaactcactggggtacccaaagaccttcccagcagtctccatgagcttcatttggacaat
aatcagattcaggccattgagtttgtggatctcagccagtacgcctcgctgcagaggttg
ggactcggcagtaaccagattcgccacattgagcacggtgctttatcttacctcaccaac
ctgagggagctgcaccttgacaacaaccgtctgcccggtgtgcccagtggtctgcctcaa
atgaagtatctgcaggttgtctacctccattcaaacaacatcaccaatgttggggtggat
gacttctgcccaacaggttttgggatgaagagggtgttctacaatggcatcagtctcttt
gacaacccgatcaggtactgggaggtgcagcccgctgcgttccgctgtgtcagtgaccaa
atggctgtacagtttggcaaccacaagaaataa
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