Rhinichthys klamathensis goyatoka (western speckled dace): 130091668
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Entry
130091668 CDS
T09701
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04382
Cornified envelope formation
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04518
Integrin signaling
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130091668 (itgb4)
04518 Integrin signaling
130091668 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130091668 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130091668 (itgb4)
04810 Regulation of actin cytoskeleton
130091668 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130091668 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130091668 (itgb4)
04515 Cell adhesion molecules [BR:
rkg04515
]
130091668 (itgb4)
04090 CD molecules [BR:
rkg04090
]
130091668 (itgb4)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130091668 (itgb4)
Exosomal proteins of bladder cancer cells
130091668 (itgb4)
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin beta subunits
130091668 (itgb4)
CD molecules [BR:
rkg04090
]
Proteins
130091668 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
PSI_integrin
EGF_Teneurin
EGF_integrin
I-EGF_1
EGF_2
Fn3_VIN3
Interfer-bind
EGF_TEN
vWA_SIBA-E
Fn3_Dep-1_3rd
SEA
Motif
Other DBs
NCBI-GeneID:
130091668
NCBI-ProteinID:
XP_056115659
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MGGWARRLTVGIYILMLAATVSRANEVNHCTAARTKTCSECIQIGTGCAYCPDEIFEYER
CDLKENLVARKCSRMVTIESTRKIEKNEQIDVSKQYSQVSPQLMRMTLLPGEEKEVEMEV
FEPARGPLDLYILMDFSNSMSDDLDNLKRMGDKLAELVGHISDDYTIGFGKFVDKVTEPQ
TDMRPAKLAQPWDNSDPPFSFRNVITLTNNITFFRQKLQQERISGNLDAPEGGFDAILQT
AVCQQQIGWRQHSTHLLVFSTESAFHYEADGANVLAGILDRNDEQCHLTPDGNYTHDIRQ
DYPSIPTLVRLLVKHNIIPIFAITNHSYSYYEKLHEYFPIAELGQLQEDSSNILSILEKA
FENIRSKISIRAEDRPKAVEAKILSQSGTFSEYGSFKITPGQIGKFKVRLKALTQVGEDH
VCKAKQVDRTGTLRVKPTTFSSALSINAEVLCQTCDCEKTPVKNALRCNGHGDLVCGKCQ
CSDGWLGPFCNCSVGASTDSAMCIQPGKTEPCSGRGDCMCGTCVCYNPNQFEGPFCQFDK
SQCQRFGGFLCNERGSCSMGRCVCTPGWSGDACECPISNDSCLDSRGGICNDRGVCKCGR
CECEHSGLPLSPTCEANFQQQLGMCEAKRSCVQCQAWNTGERKGRKCDECPFKVNMVEEL
QEDKNVIETCSFRDEDDDCTYHYTVNYPSNITDKEHRVLVKKKKDCPPAGFLWLIPLIMF
LMLLLGLLLLCCWKYCSCCQACLALLPCCGKGRMVGFKEDHYMLRQSLLTSDHLDTPMVR
SGPPKSTDIVRWKVMDNVHRGPNHPQNQIKPNPNETIQYPVSLRLNRQYSETLSQLEARD
TDVLRREVEDNLNDVFLQIPGAQRVQKTRFRTQRNSGKRQNNTIVDTVLTAPRASYPDIV
KLTEKQVQTGNFRDLKVVPGYYTVATDREAAGAVEFQEGVESVDVRVPLFVKDEDDEKKE
LLVQAVDVPVGIAKIGKDHVNITVIKEHARSIFTFLQPSYTYSRQDGVANIPISREIIED
GRTQVTYCTRDLTAKDKKDYISVDGDMSYGPGETQKTVPVKLLELGEGDGLLEDKQVKQF
VLDLSNPRQGAKLGRYPRTTITIADKPEPSVVMFKKSTQTCNTADPLYSIPVVRNRNQEG
PTTVYWRTKKASRFDLSGPLKFAPGETEKNVVIDPRAYPSPIIPETFQLELFDPSNSAVI
GERKTTLVNVSDGRGDGKIQDFQKMEFVNQAATSPGGRLYSPTNIKAVPTGPKNIRLNWN
PCTNANGYKVKYWIYGDPEAEAQVLDVKTPQAELTNLYPYCDYEMRICGYNALGEGNYSD
MIQCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGVITSYEVIYIPIDEDKKPSGP
SKKVMIDNAKKRMLLIENLQPSQTYCYKVRARNKVGWGPYREATINLASQPTRPMSIPII
PDIPIVDAEAGDDYDSYLMYSNEVLRSPTSSQRPSVTDLSEDQFVNGKWDQNFLFPGGGS
SLSRNVSSSSSTYSHSTPRPAVTNHSSSTTYISGKGGSTTHRYDLRDGGLLKEEVILRKR
SENRHYTDSDGVRDSIVMGNLPGGFLDTLGGSSFSQSTTTSYSLSSRARTQSEDINDALL
NLDSVLQDSRFNPGVPETPSRLVFSALGPTALKVSWQEPQCETGVLGYCVLYQLINGGEV
KRIEVNNPAQNSVVVQDLLPNQSYIFKVKAQSREGWGPEREGVITIESAVDPKSPLSPMP
GSPFTLSTPSAPGPLIFTALSPDTLQLSWEKPRKPNGDILGYVVTCEQLHGGGDLRSFQV
NGNAATSLTVSDLKENMPYKFKVQAQTTQGFGPEREGIITIESQDGGSMSQYSSQSVTKR
EVFNLPTEITSHTMFSEPFVSSDGMMLMSSRQITESGGTVTRQVEMVQRGVVSSSTVTKK
LERQYFEA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatgggctcggcgtctcactgtggggatctacattctcatgcttgctgcgaca
gtcagccgtgctaatgaggtgaaccactgtaccgctgccaggaccaaaacctgctcagaa
tgtattcagatcggcacaggatgtgcatactgccctgatgagatctttgagtatgagcgt
tgtgacctgaaggaaaacttggtggcccgtaaatgtagtcggatggtaacaattgagagc
accaggaaaattgaaaagaacgagcaaatcgatgtgtcaaaacagtactctcaggtgtcc
cctcagctaatgcgcatgacgcttctgcccggggaggagaaggaggtggagatggaagtg
tttgaaccagcccgtggacctctggacctctacatcctcatggacttctccaactctatg
tctgacgatctggacaacctgaagagaatgggagataagctggctgagcttgttggccat
atctctgatgattacaccatcggatttggcaagtttgtggacaaagtcaccgagcctcag
acagacatgaggccagccaaattagctcagccgtgggacaacagtgaccctccgttttca
ttccgtaacgtcatcactctcaccaacaacatcaccttcttcagacagaagctccagcaa
gagcgcatatctggcaacctggatgcccctgaggggggttttgatgccatcttacagact
gctgtctgccagcaacagattggctggaggcaacacagcacccacttgcttgtcttctcc
actgaatcggctttccattatgaggcagacggtgccaacgtgcttgcgggcatcttggac
cgtaacgatgagcaatgccatctgactccagacggaaactacacacatgacattcgtcaa
gactacccatctataccgaccctcgtgcgacttctggtgaaacataacatcatcccaatt
ttcgccattaccaaccattcctactcatactatgagaaactgcatgaatacttccctatt
gctgagctgggacagttacaagaagattcctccaacatcttaagcattttagaaaaagct
tttgagaatattcgttccaagatcagtatccgtgcagaggacagaccaaaggcggtggaa
gccaagattctgtctcagtctggcactttttctgaatatggcagtttcaaaatcacacca
ggacaaattggtaaatttaaagtccgtctgaaggctcttactcaggtgggagaggatcat
gtgtgtaaggccaaacaggttgaccggacgggaaccttgagagtcaaacccaccaccttt
agctccgcacttagcatcaatgctgaagtgctctgtcagacatgtgactgcgaaaagacc
ccggttaaaaatgctttgcgctgtaatggccatggtgatcttgtctgtgggaaatgccag
tgttctgatggatggttaggccctttctgcaactgttcagtgggggcctccacagactct
gccatgtgcatccaacctgggaagaccgagccgtgctcgggcagaggagactgcatgtgt
gggacctgtgtgtgctataacccaaaccagtttgaagggcccttctgccagtttgacaaa
tctcagtgtcagagatttggtggatttctctgtaatgaacgtggaagctgcagtatgggc
cgatgtgtgtgtacaccaggctggtctggagatgcctgtgaatgtcccatcagcaatgac
tcatgcctggacagcagagggggcatctgcaatgaccgtggtgtgtgtaaatgtggtcgt
tgtgagtgtgaacactctggacttccactgagccccacttgtgaagcaaacttccagcaa
caattgggtatgtgtgaagccaagaggagctgcgttcagtgccaagcctggaacactggt
gagagaaaagggcggaaatgcgatgagtgcccctttaaagtcaacatggtggaagagctt
caggaagataaaaacgtgatagagacgtgcagttttcgtgatgaagatgacgactgcacg
tatcactacactgtgaattatccatcaaacatcacagacaaagaacacagagtcctagtg
aagaaaaagaaagactgtccacctgcaggtttcctgtggttgattcctctcattatgttt
ctgatgctattgcttggtttgcttttgctctgctgctggaaatactgctcctgctgccag
gcgtgtcttgctcttctcccatgctgtggcaaaggtcgtatggtgggattcaaagaagac
cactacatgctacgtcagtctttgttgacctctgatcatttggacaccccgatggtgcgc
agcggcccacccaagagcacagacattgtgcgctggaaagtgatggataatgttcatcga
ggaccaaaccacccccagaaccaaatcaaacccaaccccaatgagaccatccagtaccct
gtctctcttcgtctaaaccgacaatattcagaaactctttcccagcttgaggctcgggac
acagacgtgctcagacgagaagtagaggacaacctcaatgacgtgttcctgcagatccct
ggcgcacagagagtgcaaaagactcggttcaggacacaaagaaattctggaaaaagacag
aacaacacaattgtggacacagttttaactgcccctcgggccagttacccagatattgtg
aaattgactgaaaaacaggttcaaactggaaacttccgcgatctgaaggtggttccaggc
tactacaccgtagctactgacagagaagcggcaggtgctgtggagtttcaggagggcgtg
gagtcagtggatgtccgggttcccctgttcgtcaaagatgaggatgatgaaaagaaggag
ctgcttgtgcaagcagttgatgttccagttggaattgcaaagattggcaaagatcatgtc
aacattacagtgattaaagaacatgctaggagcatctttaccttcctgcagccatcatac
acatacagtcgtcaggacggtgtggcgaacatcccgatcagtcgtgagattatagaggat
ggacggacacaggtcacatactgcacccgtgacctcactgccaaagacaagaaggactat
atctcagtcgatggagacatgagttatggaccaggggaaacgcagaagaccgtcccagtg
aaactcttggagcttggggaaggagacggactgctggaggacaaacaggtcaaacagttt
gtgctggatctgagtaacccacggcaaggggctaaactaggccgttacccacgaaccacc
atcaccatcgctgataaaccagaacccagtgtcgtaatgtttaagaagagtactcaaact
tgcaatacagccgatcctctatactccatccctgtggtacgcaatcgaaaccaggagggt
ccgaccactgtgtactggcgcacaaagaaagcctctcgctttgacctttccggtcctctc
aaatttgctcctggcgagacggaaaagaatgttgtcattgatcctcgtgcgtatccatct
cctatcatacccgagaccttccaactggaactattcgacccaagcaacagtgcagtcatt
ggagagaggaagactacgctggtgaacgtctccgatggtagaggggatgggaaaatccag
gatttccagaaaatggaatttgttaatcaggcagccacatctcctggaggacgcctctac
tccccaaccaacatcaaagctgtccctaccgggcctaaaaacatccgtctgaactggaac
ccctgtacaaacgccaatggttacaaggtgaagtactggatatatggagatcctgaggct
gaagctcaggtgctggatgtgaagactcctcaagccgagctgactaatctttacccgtac
tgcgattacgagatgcgcatatgtggctacaatgcacttggagagggcaattacagcgac
atgatccaatgccagactctggaggatgtacctggtgaacctggtcgcttggctttcaat
gtcatcagcccgactgtcactcaggtcagctgggcagagccagcagagacaaatggtgtt
atcacttcatatgaggtcatctacatacccatcgacgaggacaaaaagccttcaggacct
tctaagaaggtgatgattgataacgccaaaaagcgcatgctgctcatcgagaatctgcag
ccttctcagacttattgttacaaagtgcgtgctcgcaataaggtgggctggggcccgtac
agagaagccacaatcaacctggcatcacagcctaccagacccatgtcaattcccatcatt
cccgacattcccattgtggatgcagaagctggtgatgactatgacagctatctgatgtac
agtaatgaagtactacgatccccaacaagtagccagaggcctagcgtcacagatctgtcc
gaagatcagtttgtaaatggaaagtgggaccagaatttcctgttccctggaggaggcagt
tccctctcccgcaacgtcagctcctcctcatccacgtacagccattccaccccccgcccc
gctgtgaccaatcacagcagctccacaacgtacatttctggcaaagggggctcaactaca
catagatatgaccttagagatggcgggcttctcaaagaggaagtgatcctgaggaagcga
tcggagaacaggcattacactgacagtgatggtgttagggattctatcgtcatgggaaac
cttcctggaggatttttggacactttagggggctctagcttcagtcagagcacaactacc
agctacagcttgagctccagagctcgtactcagtctgaagatatcaacgatgcactgctg
aacctggatagtgttcttcaggactctcgcttcaacccgggtgttcctgagactcccagc
aggctggtgttctctgccctggggcccacggccctgaaagtgagctggcaggagccccaa
tgtgagaccggtgtactgggttactgcgtcctctaccagctaatcaatggaggtgaggta
aagcgtatcgaggtgaacaatcccgctcagaactctgtggtggttcaggatctcctgccc
aaccaatcctacatcttcaaagtgaaggcccagagtcgagagggctggggtcctgagaga
gagggagtcattaccattgagtctgccgtcgaccccaagagccccctgagcccaatgcca
ggatctccgttcactctcagcactcccagcgctccaggacctttaatcttcacagctttg
agtccagacacgctgcagctgagctgggagaaaccacgcaaacccaacggagacatcctg
ggctacgtggtcacctgtgaacagctgcacggtggaggagatcttcgctccttccaggtg
aatggcaacgctgcgacttctttgacggtgtctgacctgaaagaaaacatgccgtacaaa
ttcaaagttcaagcccaaaccacacagggcttcggaccggagcgagagggcatcatcacc
atcgaatcccaagatggaggctctatgtcacagtacagcagtcagtcagtcacaaagaga
gaggtgtttaacctaccaacagagattacttcacacaccatgttctcggaacccttcgtg
tcttcagacggtatgatgttgatgtcgagcaggcagatcacggagtcgggcggcaccgtc
acacggcaggtggagatggtgcagagaggagtcgtgtccagcagcaccgtcacaaagaag
ctggagaggcagtacttcgaagcctaa
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integrated database retrieval system
