Rhinichthys klamathensis goyatoka (western speckled dace): 130092334
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Entry
130092334 CDS
T09701
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00280
Valine, leucine and isoleucine degradation
rkg00650
Butanoate metabolism
rkg01100
Metabolic pathways
rkg04146
Peroxisome
Module
rkg_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130092334 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
130092334 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130092334 (hmgcll1)
Enzymes [BR:
rkg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
130092334 (hmgcll1)
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Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
130092334
NCBI-ProteinID:
XP_056116149
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MGNVSTAVKHCLSYETFLRDHPWLPRLLWEEKCSELPKLPLHVKIVEVGPRDGLQNEKEI
VPTEVKIQLIDMLSQTGLPVIEATSFVSSKWVAQMADHSAVLKGIKRSPDVRYPVLTPNI
QGFQAAVAAGATEVAVFGSASETFSWKNINCSIEESLQRFEQVISAAKHEGIPVRGYVSC
ALGCPYEGQVNPSQVTKVAKRLFELGCYEVSLGDTIGVGTAGSMAKMLSDVLTEVPVDAL
AVHCHDTYGQALPNILIALQMGVSVVDSSVAGLGGCPYAKGASGNVSTEDVLYMLHGLGI
ETGVDLLKVMEAGDFICRALKRTSNSKVSQAAINI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgtctccactgcggtcaagcactgtctgagctatgagactttcctgcgggat
catccctggttgccacggctcctgtgggaagagaagtgttcagaactgcctaagcttcca
cttcatgtcaaaattgtggaggttggaccaagagatgggcttcaaaatgagaaggaaata
gtgccgacagaagtcaaaatccagctgatagacatgctctctcagaccggtctgcctgtc
atcgaagccactagctttgtgtcttcaaagtgggttgctcagatggcagaccacagtgca
gtgttgaaagggattaaaaggtctcctgacgtaagatacccggttctgactcccaatatt
cagggcttccaggcagctgttgcagcaggagctactgaagtggcagtgtttggttctgcc
tcggagacttttagctggaagaacatcaactgctctatagaggagagtctgcagaggttc
gagcaggtcatctccgcagccaaacacgaaggcattccagtgcgcgggtacgtttcctgt
gctctcggctgtccgtatgagggacaagtaaatccgtcacaagtcacaaaggtggcaaag
cggttgtttgagctgggctgttatgaggtatccctgggggacaccattggcgtaggaacc
gcgggctccatggccaagatgctgagcgatgtgttgacagaggtgcccgtcgacgcactg
gcggtgcactgccacgacacttacggtcaagcgctgcccaacattctcattgctttgcag
atgggggtttctgtggtcgactcctcggtcgccggcctcggaggatgcccgtatgccaag
ggagcgtctggcaatgtttctacagaggatgttttatatatgctacatggtcttggaatt
gaaaccggggtggacctgttgaaggtgatggaagcaggagatttcatctgccgagcctta
aagcgaaccagtaactccaaggtcagccaagctgctataaacatctag
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