Rhinichthys klamathensis goyatoka (western speckled dace): 130092411
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Entry
130092411 CDS
T09701
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130092411
Membrane trafficking [BR:
rkg04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
130092411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
130092411
NCBI-ProteinID:
XP_056116238
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MSGEESGVPQDLLESVQEAVGQQVKLCLVQKVNLEVKGDKLDSRILALAPHRVFLLSTRV
PAKVDQSFSVFDIQSISSVKQKQLLVDYDRGQLSLRLASDRDTDDFIAQIGTNIQEICPG
LDPLRVIKKLVLKPVERITSLQTLWENHIQAEAGPCGGFSRLYWCVCDQMGVPYRDEVQW
DVDTIYLSQDTRELCLQDFIHLDNKDLLAITAALEFNQWFIKLSIKDFKLTADLCDQIFR
VVSRSTRLEELTLDNTGLKSDFAQRFAAALSQNPNSALKTISLANNCIEDKGVMFLSPAL
SKLTPGLKHLDLSKNSLSSKGVNILAQCFCSTSLTHLNLSGNTLRGEDMPHLWSFLSQPN
HLHTLDLSNSESSLDLVCSSLQRGSLKHLTVLNMSRSVFSHKRGKEFPASFKQFFSSASS
LQNICLSGTRLPSEGLKALLLGLACNSNLRDVALDISGCELRSAGAQILEGCIAEIPNIT
SLDVSDNGLDSDMSTLLEWLGKNRSIKHLSIGRNFSNIKTKNLGQVLVSVVQMIQEEDSP
LASLSLADSRLKADLSLVLNALGGNTSLTHLDISGNNMGDFGAKMLAKALQVNTKLRTLI
WDRNSVSAQGLQDMASALEKNYTIRFMPVPITDAAQALKNSPEKTEDALLKMEQYLLRNH
ESRRYLQDQAFRLQQGLVTSTTRQMMAQVCVQVQDHLNSLRFSKSDRVQQDMKTAESLMT
DAKNSTTLLRSLYDQRSSAGVNDGSAGVCVQQVQEKLCSVAGEISILIDQQLQGLLVSML
DTAQSVCPHVMQQACLRENLLHASEGRTSVSKAFITSTLLEQSAFDIINKISEVKLSMAS
CLSEYITDEILQSLSRSQHTLAGHLSRRGQQLLHQDSQETEVLDEKEIQTNNLVPAEPEP
QRTHKAKRKSIHSRMFRPMSSAFELDFDLCKALEDVSLCVDDLPPPPTPPPPQPESPPPV
EAELPQPQPMSFSDLPTGDTPPLQHATKFRPRRTKKAKPSRAAVRRQNTLRESQRCQPIS
TDPVQEVDQSSSVDEGVPEFYSRKVTNIVAKAPAADTEKSRDSRPSGFFSLIKHRSSTKA
TPTSPTPGAMTTATTMTPVSVTTAEKDTPPPEPVVIPEPVAHEVKGHVQEAVKRGSPLTG
RHMGAQVLGNDLLLAEIRAKQEKRKKAGVSPSAASKAEAPDEGGDHGHATPAVRKEAQDE
PAARKLKHTPQHTHTPQHKHTPEDTHTPAHTHTAEHTPLSEHRCSRPSVSFSTSDCIIPP
HLDDVPESPVLPMLSVTEGAEPGPVTHSTEGGASSAPPPESPVFDTHTSHTLSVGRSISC
VQSRTDPEEGDTERQRTKSLPSAAPANHSA
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaagagtcaggcgttcctcaggatctgctggagagcgttcaggaggccgtc
gggcagcaggtcaagctgtgtttggttcagaaggtcaacctggaggtcaaaggtgacaaa
ctggacagcagaatcctggctctcgctcctcatcgagtgtttctgctgagcacacgagtg
cctgctaaagtcgatcagtccttcagcgtctttgacattcagagcatcagcagtgtcaaa
cagaagcagctgctggtggactatgacagaggacagctgtctcttagactggcgtctgat
cgggacactgatgattttattgcacaaataggaacaaacattcaggagatttgtccagga
ctcgacccgctgagggtgataaagaaacttgtgttaaagccggtggagagaatcaccagt
ttacagacactctgggaaaatcacatccaagcagaagccggaccctgtggcggtttctcg
cgtctctactggtgtgtgtgcgatcagatgggcgttccctacagagacgaggttcagtgg
gacgtggacaccatctatctgtctcaggacacacgggagctctgcctgcaggacttcatt
cacctggacaacaaggatctgctggccatcactgctgcactggagttcaatcagtggttc
atcaaactctccatcaaggactttaaactgactgcagatctgtgtgatcagatattcaga
gttgtctctcgatctaccagattggaggaactgactctggacaacaccggactcaagagt
gattttgctcagaggtttgctgctgcattgagtcagaatccaaactcagcgttaaagaca
atcagtctggccaacaactgtattgaagacaaaggtgtcatgtttctgagccctgcactg
tctaaactcacacctggactgaaacacctggacctgtccaagaactcactgtcatctaaa
ggtgtgaatattctggctcagtgtttctgctccacatcactcacacacctgaatctgtct
ggaaacacactaagaggggaggacatgcctcacctgtggagtttcctgtctcaacccaac
catctgcacacactcgacctgtcgaacagcgaatcttccctcgacctggtgtgttcgtca
ctgcagcgcggctctctcaaacacctgacggttctcaacatgtccagaagtgtcttcagt
cacaagagagggaaggagtttccagcctccttcaagcagttcttcagcagtgcttcgtcc
ctccagaacatctgcctctctggaaccagactcccttctgaaggactcaaagctctgctg
cttggtctggcctgtaactctaacctgagagatgtagctctggacatcagtggctgtgag
ttgcggtcagcaggcgctcagattctggagggctgcatcgctgagatcccaaacatcacc
agcctggacgtgtctgacaatgggctggactcggatatgtctacgctgctcgagtggctc
gggaagaaccgctccatcaaacacttgtccatcggcaggaacttcagcaacatcaaaacc
aaaaatctcgggcaggttctggtgtccgtggtccaaatgattcaggaagaggattcaccg
ctcgcgtctctgtctctggccgactcgcgtctgaaggccgatctgtcgctggttctgaac
gctctgggcgggaacaccagtctgacacacctggacatcagcgggaacaacatgggagac
ttcggggccaagatgctggccaaagctctgcaggtcaacaccaaactcaggacgttgatc
tgggaccgaaactctgtcagcgctcagggactacaggacatggcctctgctctggagaag
aattacaccatcaggttcatgccggttcccatcacagacgcggctcaagctctgaagaac
agcccggagaaaactgaagacgcccttctgaagatggagcagtatctcctgcgtaaccat
gagagcaggcgatatctgcaggatcaggcgttccggctgcagcagggcctcgtcaccagc
acaacacgacagatgatggcgcaggtgtgtgtgcaggtccaggatcatttgaactctctt
cgctttagtaaaagtgacagagttcagcaggacatgaagacggccgagagcctgatgaca
gacgccaagaactccacaacacttctgcgcagtctgtatgaccagcgctcatcggcgggc
gtcaatgacgggtcagcgggagtgtgtgtgcagcaagtgcaggagaaactgtgttcagtg
gcaggagagatcagcatactcatagaccagcagctacagggtttgctggtgtcgatgttg
gacacggctcagagtgtgtgtcctcacgtcatgcagcaggcgtgtttgcgtgagaatctg
ctccacgccagtgaagggaggacgagtgtgtcgaaggccttcatcacctccaccctgctg
gagcagtcggccttcgacatcatcaacaagatcagtgaggtgaagctcagtatggcgtcg
tgtctctctgaatacatcactgatgagatcttgcagtcactttctcgctctcaacacaca
ctggcgggtcatctgagcaggagaggtcagcagctgctgcatcaggactcacaggagaca
gaagttctagatgagaaagaaatacagacaaacaacctggtaccagcagaaccagaacca
cagcggacacataaagccaagaggaagagcattcacagcaggatgttcagacccatgtcc
tccgccttcgagctggactttgatctgtgcaaggcattagaggacgtgtctctctgtgtg
gatgatctgccgccgcccccgactccgccccctccacagccagagtccccgcccccagtg
gaggcggagctaccacagcctcagcctatgagcttcagcgacctgcccaccggagacacg
ccccctcttcagcacgccaccaagttccggccgcggcggaccaagaaggccaaacccagc
agagccgccgtaagacgccagaacacactcagagaatcacagcgctgtcagccaatcagc
accgaccctgtgcaggaagtggatcagagcagctctgtggatgagggcgtgccagagttc
tactccagaaaggtcaccaacatcgtagccaaagcgcctgccgcggacacagagaagagc
agagactctcgaccgagcggcttcttcagcctcatcaagcatcgctcctccaccaaagcc
acgcccaccagccccacccctggtgccatgacaaccgccacaacgatgacaccggtctcc
gtgacaactgcagaaaaagacaccccgcccccagagccggtcgtgatcccggagcctgtt
gcgcatgaggtcaaaggtcacgtgcaggaggccgtcaaacggggcagtccgctgacgggg
cgtcacatgggcgcgcaggtgctcggcaacgacctgctgctggcggagatacgagccaaa
caagagaagcgcaagaaggcaggcgtgtctccatctgcagcatccaaagctgaagctcct
gatgaaggtggagatcacggacacgctacaccagcagtccggaaagaggctcaagatgaa
cctgcagccagaaaactcaaacacacacctcaacacactcacacacctcaacacaaacac
acacctgaagacacccacacacctgcacacacacacacagctgaacacacaccgttatca
gagcaccgctgcagccgtccgtccgtgtcgttcagcacctctgactgcatcattcctcct
catctggacgatgtcccagaatcccctgttctgcccatgctgtcagtcactgagggggcg
gagccgggtcctgtcactcacagcacagagggaggagcctcatctgccccccctccagag
tctcctgtgttcgacacacacacctcacacacactgagcgtcggccgctccatctcctgc
gttcagtcccggaccgacccagaggagggcgacaccgagcgccagcgcaccaagtccctc
ccttcggccgctccggccaatcacagcgcgtga
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