Rhinichthys klamathensis goyatoka (western speckled dace): 130092416
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Entry
130092416 CDS
T09701
Symbol
lingo4a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130092416 (lingo4a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130092416 (lingo4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
LRR_5
Ig_3
ig
Ig_2
LRR_LRWD1
V-set
LRRNT
Sp38
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
130092416
NCBI-ProteinID:
XP_056116245
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MCVAADWRRLHWWVVLQWVVGVALSAPCSQRCDCVPKLPIVNCSSRQLASVPDGLPDDTE
TLNLSGNQLRTLTRRQFSGLTLLRELDLSENMLTAIEAEAFAGLQDLLKLRLARNRLKII
PVGAFSGLPNVQFLDISENEILVFLDDMFREMPSLQKLEASENDLVFISNRAFGGLANLQ
ELNLDRCNLTSVPVEALSPLTGLLQLRLCRLGLTSLPNHSFRTLIHLRELHVSRCPWLDS
LAANSLIGLNLSSLTLSHCNLSAVPYSPLHHLVYLRYLDLSYNPITIILPNLLGDLLRLQ
ELHLVGAGLLRIEPGAFRNLAGFRLLNVSGNRLATLESSAFHSVGTLEVLRLDGNPLACD
CRLLWVMRRRSRISFGRSPTCGSPVQVQGRMLHDFSEVELPRLFTCRQARILTRKPQDVR
TDEGHTVLFFCVADGDPAPVITWMNPKRSALTGSGRVRVLPNGTLEVRYAQVQDSGYYLC
IASNAAGNDSVSVSLRVRGFPASTRNRSGPFFLEGWSFTSGQAPVNGSQPFPFDVKTLVI
AVTMGFLSFLSSVAVCFVFMFFWSQSKGQIKHTATIDFVPRSSASANGTGRTTVETGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggctgctgattggaggaggctgcactggtgggtggtgctccagtgggtagtg
ggcgtggctttatcagccccgtgttcccagcgctgcgactgtgtcccgaagctccccatc
gtgaactgctcatccagacaactagcgtctgttcccgacggccttcccgacgacaccgag
acgctcaacctgtccgggaaccagctgaggacgctgacgcggcgccagttctccgggctc
acgctgctacgcgagctcgatctcagcgagaacatgctaacggcgatcgaggccgaagcc
ttcgccggcttgcaggacctcctcaagctgagacttgctcgcaaccggctcaagatcatc
ccagtcggagcgttttccggccttcccaacgttcagtttctagacattagcgagaacgag
attttagtgtttctcgacgatatgttccgagagatgccgtcgctacagaaacttgaggct
agcgagaacgacctggtgtttatctcgaaccgggccttcggtggcctggctaatctccag
gagctgaatctggaccggtgcaacttaacgtcggtgccggtcgaggcgttgtcgccgcta
accggtctccttcagctccgtctctgcagactcggactcacctcgcttcccaatcactcc
ttccgtacgctaatccacctacgggagctacacgtatcccgctgcccgtggttagactcg
ctagccgctaacagcctaatcggacttaatctttcctcgctaacgcttagccactgcaac
ctgagtgccgtgccgtattccccgcttcaccacctcgtgtacctgcgatacctggattta
tcctacaatccaatcactattattcttccaaatctcctcggggatttgctacgccttcaa
gagctgcatttagtcggcgccggattgttgcgtatcgaaccgggcgctttccgtaaccta
gcgggcttccggctcctaaacgtgtctgggaaccgattagcgacgctggagtcgtcggcg
ttccactcggtcgggactttagaagtgctccggttggacgggaacccgttagcgtgcgat
tgccgacttctctgggtgatgcgccgacgctcgcggattagcttcgggcgttcgcccacc
tgtggctcacctgtgcaggtgcaaggccggatgctccacgacttctccgaggtcgagctt
ccccggttgttcacgtgccggcaagctcgcattctgacccgtaagccgcaagacgttcgt
acggacgaaggccacacggttttgttcttctgcgtggcggacggagacccggcgccggtg
atcacctggatgaacccgaagcgctccgctctcaccggttcggggagggtccgtgtgctt
cccaacgggacgcttgaggtgcgttacgcgcaggtgcaggatagcggatactacctgtgc
atcgcttcgaatgccgcggggaacgatagcgtctccgttagcctgcgtgtgcgcgggttt
ccggcgtccactcgaaaccgttcagggccgttctttctggaaggctggagcttcacgtcg
ggacaagcgccggttaacgggtcgcagccattcccgttcgacgtgaagacgctagtgatc
gcggtgactatggggttcctgtcgttcctgagctccgtcgccgtgtgcttcgtgttcatg
ttcttctggagtcagagcaaagggcagatcaaacacacggcgaccatcgacttcgtcccg
cgcagctccgcgtcggccaacggaaccggtcggaccaccgtggaaacgggccggtttacc
atgaagctgatctga
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