Rhinichthys klamathensis goyatoka (western speckled dace): 130092467
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Entry
130092467 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130092467
04121 Ubiquitin system [BR:
rkg04121
]
130092467
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130092467
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130092467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF659
Ig_Shg
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
130092467
NCBI-ProteinID:
XP_056116297
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MSKHIQRKHPDITLHEHRSVEQPEQALAEKKQLSIENAFAQTYRASSEKHRKITGALGVF
IDKDLQPFSVVEDVGFKHLMKTLDPRYAVPSRTYFSAVVIPGLYDKTRKAIESDLAKTES
LALITDSWTSRATQSYMTVMVLYILDWQMKSAVLQTRPLYESHTSAHLAEELKNAVTEWK
LQRPNTTIPVTTDNAANIVNAVNETVELGPQIGCFAHTLNLAAKRAVSINAVSRLLGKVR
KVVTFFHRSTTANQALAVKQEMLNLPKHKLINDVITRWNTSHDMLSRYVEQQPAIYSALT
MDKNLRSHVTGIAMLTDVEQKMAEQLIEVLKPLKTVTTLMSSETTPTISMILPLKEMILK
SMVPGDEDSTVIKEAIAQDLDRRRYTNPDLQKYLQKATALDPRFKSLPSLDESSLDRLYK
DLATEILEYEPQV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcatatccagcgaaagcatccagacataacgcttcatgaacacaggtcagtc
gagcaacccgaacaggcactagcagaaaaaaaacaattgtctattgagaatgcttttgct
cagacctaccgggcctcttcagagaaacacagaaagataaccggtgcattgggagtgttt
atcgataaagatttacagcccttttctgtagtagaggatgtggggtttaaacatttaatg
aaaacgctcgacccacgttatgctgtgcccagtcgcacttatttcagtgcggttgtcatc
cctggtctttacgacaaaacgcgcaaagccatcgagagtgatttggcgaaaacagaaagc
ctcgcactgattacggacagttggacttctcgggcaacacagagctacatgactgtgatg
gttctctacattttggactggcagatgaaaagtgccgtgctgcagacccgcccactctat
gaaagccacacaagtgcgcatttagcagaggagttgaaaaatgcagtcaccgagtggaag
ctgcagcggccaaatacaactatacccgtcaccacagataatgctgcaaacatagttaat
gcagtcaatgaaactgttgagctgggaccccaaattggctgttttgctcacactttgaat
ctcgcggccaagagggcagtgtcaatcaacgctgtgtcccgcctccttgggaaagtgagg
aaagttgtcaccttttttcaccgcagcaccacagccaaccaagcacttgctgtgaaacag
gaaatgttaaacttgccaaagcacaagttaatcaatgatgtgataactcggtggaacaca
tcacatgacatgttgtcacgatatgttgagcagcagcctgccatctattcggcattaaca
atggacaaaaacctgaggagccacgtcacgggcattgcaatgttgactgatgtagaacaa
aaaatggcagagcaactaattgaagtactcaaaccactgaagactgtgacaacactcatg
agcagtgaaacaacccccacaatttcaatgatcctcccactgaaggaaatgattctcaaa
tccatggtacctggagatgaagacagtacagttatcaaagaagccattgcacaggacctg
gatagaagaaggtacactaaccctgaccttcagaagtacctccaaaaagccacagccctg
gatcccaggtttaaatccctgccctcccttgatgaatcctcccttgacagactctacaaa
gatcttgccacagaaatcctggagtatgaaccacaggtatga
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