Rhinichthys klamathensis goyatoka (western speckled dace): 130093141
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Entry
130093141 CDS
T09701
Symbol
srfa
Name
(RefSeq) serum response factor a isoform X1
KO
K04378
serum response factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130093141 (srfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130093141 (srfa)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
130093141 (srfa)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
130093141
NCBI-ProteinID:
XP_056116516
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MLGGNGKARGAGRSGNGTGLTHLQVGSTSGALGAVNSSINLPDGGRYDDRASVEAVLSGS
DGDSDSGDDEESPVLDRRGVKRERSEMEVGGSSGAIAALSAGYGGVSSGVAGAKPGKKTR
GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRK
LQPMITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGLTEPKE
MMKTTFTSATLPGGTNSTTTLSSASSSPSSSSVAMHTHTHTHSSMSSLSGTTCWPMSAQS
VSSANGTVLKSSPAGVMQLPGGFTLMPGASLPPGTHTIPLSQLQTHSLAIQCPQTQNSHA
MTSTSTTSSSAVPAHTQPAAQATLFRLPATVSLTGGAMPQQLQAIQLHPSPQSSDSSPEI
SQTSSSSAVSHTATIVTSSVPSSVAGHMMYPGAHVMYATSTSGLADGGLTVLNTFPQSHA
AMHVSHTQAQDSGAVPQMFLTGPPGTVQIPVSAVPLHSMLINQQPTGSSGATLTELRVVN
MDNPKGD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacgggaaggccaggggggctggacgctcaggtaacggcacaggcttg
acccatctacaggtgggcagcacatctggggctttaggggcggtgaactcctccataaac
ctgcccgatgggggcagatacgacgacagggcgtcggtcgaggcagtgctgagcggctct
gatggagactcggactccggggatgatgaagagagtcccgtgctggacaggagaggagtg
aagcgggagaggagcgagatggaggtcgggggatcctcgggagctatcgctgcactgtcg
gcggggtatggaggagtttccagcggggtggcgggtgcaaaacccggcaagaaaacgcga
ggacgggttaaaattaagatggagtttattgacaacaagctgaggagatacacgaccttc
agcaagagaaagactggcattatgaagaaggcttacgaactgtccaccttaacggggacg
caagttctgctcttggttgccagtgagacaggccacgtctacacatttgccacgcggaaa
cttcagcccatgatcaccagtgagacgggtaaagccctcatccagacctgcctgaactcc
cctgactctccaccccgtacggacccttcaacagaccagcggatgagtgccacgggattc
gaggagacggatctcacctaccaggtctcagaggccgatggtctcacagagccaaaggaa
atgatgaagaccacgttcacttctgccactttacctggaggcaccaacagcacgaccaca
ctgtcctcggcgtcctcctctccttcctcctcctcggtggccatgcacacacacacacac
actcacagcagcatgtcctcgctgtccggcaccacctgttggcccatgagcgctcagagc
gtctccagtgcgaacggcaccgtgctcaaaagctctccggctggcgtgatgcagctgccc
ggaggattcacactcatgccaggcgcttctctcccgcctggcacacacactattcctctc
agccagctgcagacacactctctggccatacagtgtccacagacgcaaaacagccacgcc
atgactagcaccagcaccacctcctcctccgctgtccccgcacacacacaacccgctgct
caggccacgctcttccgtctgccggccactgtctcgcttacaggtggtgcgatgcctcaa
cagctacaggccatccagcttcaccccagtcctcaaagcagtgacagcagtcccgagatc
agccagacctccagcagctccgccgtaagtcacactgctactatagtcacatcctcagtg
ccttcttcagtggcgggtcacatgatgtaccctggagcgcacgtcatgtatgctacatcc
acctctggcctggccgacgggggtctcactgtgctcaacaccttcccacagtcgcacgcc
gcgatgcacgtgtcccacacacaggcccaagactcaggtgcagttcctcagatgttcctc
acaggacctccaggaactgtacagatcccagtttcagctgttccgcttcattcgatgttg
ataaaccagcagcccactggtagcagcggcgccacgctcacggagctgcgggtggtcaat
atggacaatcccaaaggagactga
DBGET
integrated database retrieval system
