Rhinichthys klamathensis goyatoka (western speckled dace): 130094407
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Entry
130094407 CDS
T09701
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130094407 (tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130094407 (tbc1d4)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130094407 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130094407 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
130094407 (tbc1d4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
IHD1_N
PTB
Motif
Other DBs
NCBI-GeneID:
130094407
NCBI-ProteinID:
XP_056116633
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MEGQDGKGNNNNDSNQKADKRFALCYMGWSSLDRRTTLPMLPWLVAEIRRKSEKNEPGPA
QAREVQLNLSPSLIRCVPANSSNPSVFIFEHKAQFISRFIHNSHDLSYFAYLIRSQPENP
ESEMACHVFKACDPNQVPEVISSIRQVSKAALKEESKPKQDSDESFYNSQKFEVLYCGKV
TVNHKKAPSTLIDDCIDKFRQHEIERKRLRLLSGQRSSTEAPVEFIMGDDPLSSSLCEVD
EPEAEHGSIEEDLSELANGKLALTSSSSTGSLRGAFPECILEDSGFGEQQEIRTRCNSLA
GGLQKKPRETGKGSTRRRHASAPNNVQPTDADKNRTMLFQVGRFEVNLISPETKTVVLEK
NFKDISSCSQGVKQTDHFGFICRDVEVSGPAQYVCYVFQCASESLVDEVMLTLKQAFTTA
AAMQSSKNQIKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLSDNEQVNIFERVQ
KMKPASDHEENELVILHLRQLCETKQKSHVHIGEVSQQNASGSTLTSDNSSVGRNKLDLL
KNKARSSLTSSLENIFSRGASRMRMRLGSMGSFDRGDSPGDSPPGTPPSYLEDDPDAPQF
RRRAHTFSHPPIKKKISFTEVSSQACKAPLRRQQSLAPELLQSSTVGISRARSVSESDSY
FSLSSSFHTPTFLKSFYQGSLGSLASLSDSGSLKSGNGEGRKRSLSGCSTDSLTLVPPRR
VSWRQKIFLRVASPMNKPSASMQNVDHMDGRELLPLSPRALNQDQDFQASPLSPEQSFGG
EKGRRCPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDYPEVCQCSKDL
QALWDKKLSSPCRTKVQWDKEEINGAVCQGVPKSRRGEVWLLLFQQYRLRHRLPQRQQSP
ETPYQDLLKQLTAQQHAILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGYC
QGISFVAGLLLLHMSEEQAFDTLKFLMYDLGIRRQYRPDMISLQIQMYQLSRLLHDYHRN
LYTHLEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFKVALCLLSNHE
GEILECDCFESIVEYLKSTIPTLTHSQMEETITKATEMDISKQLHAYEVEYHVLQDELSD
APPPSEESDRLDKLEKSNSQLKKQNMDLLEKLQAARLKIQTLESSVESFLSRESKMKHLI
RSLEQEKASYQKTIERMRSSLPSEAMAEVEMTQLKSSNNGKAKAACKKP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataataataatgacagtaatcaaaaggcagacaag
aggtttgcgctgtgttacatgggctggtcgtctctggacaggcgaaccacgctgcccatg
ctcccgtggctggtggcggagatccggaggaaaagtgagaagaacgagcccggtcccgca
caggccagagaagtccagctgaatctctcgccctctctgatccgctgcgtccccgcaaac
agcagcaacccgtccgtgttcatattcgaacacaaagcacagtttatatccaggtttatc
cacaatagtcatgacctgtcttattttgcctaccttatcagaagtcaaccagagaaccca
gagtctgagatggcatgccatgtgttcaaagcatgcgatccaaatcaggtgcctgaggtt
attagcagcattagacaggtgtctaaggctgcacttaaggaggaaagcaagcccaagcaa
gatagtgacgagtctttctacaactcccagaagtttgaagtactttactgtggaaaagtg
actgtcaaccacaaaaaagccccttcaactctaattgacgactgcattgataaattccgc
caacacgagattgaacgcaagcgtctgcggctcctcagcggccagcgtagctccaccgaa
gcccccgtagagttcatcatgggtgacgaccctctaagctcctccctctgcgaagttgac
gaaccagaggcagaacatggctcgattgaggaagacctgtctgagttggccaatgggaaa
ctggccttgaccagctcctccagtacaggcagcttgcgaggggcctttcctgagtgcatt
ttggaggactcgggatttggggagcagcaggagattcgtacgcgctgtaatagcctcgcg
ggcggcctgcagaaaaagcccagagagactggcaaggggtcaacgcgtaggagacatgct
agcgcgcccaataacgtgcagccgactgatgctgacaagaatcgcacaatgttgttccag
gttggacggtttgaagtgaatctcatcagccctgaaaccaaaactgtggttctggagaag
aattttaaggacatctcgtcctgttcacagggtgttaaacagacagatcactttggcttt
atttgtcgggatgtggaggtgtctggcccagcccagtatgtgtgttacgtgttccagtgc
gctagtgagtctctggtggatgaagtaatgctcaccctaaaacaagcctttaccacagca
gcagctatgcagagctccaagaaccaaatcaaactgtgcgaggcttgtccaatgcacgac
ttgcacaagctctgtgagagaatagaaggcttgtatcctcccagggcgaaactagccatt
cagaagtacctgtcacaactgagcgacaacgagcaggtgaacatattcgaacgggtgcag
aaaatgaagccagcatctgatcacgaagaaaacgagcttgtgattcttcaccttcgacag
ttgtgtgagaccaagcagaaatctcatgttcatattggagaggtctcacagcagaatgct
tctggcagcactctgacctctgataactccagtgtgggccgcaataaacttgacttgttg
aagaacaaagcccggagttctttgacgagctccctggagaacatcttttcacggggagcc
agccgtatgcgaatgcgtctgggcagcatgggaagctttgaccgcggcgactctcctggt
gactccccacctgggactccacccagttaccttgaggacgacccagatgccccgcagttc
cgtcgccgggcacacaccttcagccacccgcccatcaagaagaagatctccttcactgag
gtttcctcccaggcctgtaaagctccactgcgccggcagcagtctttggccccagagctg
ctgcagagcagcactgttggtatctcaagagcgcgcagtgtctctgagagtgactcctac
ttcagtctatcgtcctccttccacacccccactttcctgaaaagcttttaccagggctcc
cttggctcactggcctccctgtcggacagcgggagtcttaagagtggtaatggggagggc
aggaagaggtctctgtcaggctgtagcaccgattctttgaccttggtgcctccacgcaga
gtttcttggcgccagaagattttcctgagggtagcgtcacccatgaacaaaccctccgct
tctatgcaaaacgtggaccacatggatggccgggagctgctgccgctttctcctcgggct
ttgaaccaggatcaagactttcaggccagccctctgtccccagagcagagctttggtgga
gagaagggccggcgttgcccagctgactacagggccctgtggaagaaagccatccaccaa
cagattttgctcatccgcatggagaaagagaaccagcgcctggaagccagccgtgatgaa
ttgcacattcgtaaaatgaagctggactacccggaagtgtgtcagtgctccaaagatttg
caggccctgtgggacaaaaagttgagcagcccctgccgcactaaagtacagtgggacaaa
gaagagatcaacggcgccgtctgccagggtgtccccaaaagtcggcgaggtgaggtgtgg
ctcctcctcttccagcagtatcgtctgcgtcaccgtctgccgcagcggcagcagtctcct
gaaacgccttatcaggatctcctcaaacagctcacagcacagcaacacgccatcctggtc
gacctcggccggacattcccaacgcaccagtatttcagtgctcagctgggagctggacag
ctgtctctgtacaatctcctgaaggcctactccctgctggacacggaggtgggctactgc
cagggcatcagttttgtggccggtttgctactgttgcatatgagcgaggaacaggctttc
gacaccctcaagttcctcatgtacgatctgggcattcgccgacagtaccgtcccgacatg
atctccctgcagatccagatgtaccagttgtcccgtctgctgcatgactatcaccgtaac
ctgtacactcacctggaggagcacgagatctgccccagcctgtacgccgcaccgtggttc
ctcactctcttcgcctctcagttcccgctcggctttgttgcccgtatatttgacctcttg
tttgtccaaggcacagaggtgatctttaaggtggccctgtgtttgctgagcaaccacgag
ggggagatactggagtgtgactgctttgaaagtatcgtggagtaccttaaatccaccatc
cccaccctcactcacagccaaatggaagagacgatcaccaaggcgactgagatggacatc
tccaagcagctgcacgcatatgaagtggagtaccacgtcctgcaggatgagctgtcagac
gctcctccaccatcagaggagtctgataggctggataaactggagaaatccaattcccag
ctcaagaaacagaacatggacttgctagagaaactgcaggcggctcgtttgaagattcag
acattggagagcagcgtggagagtttcctgtcacgagagagcaagatgaagcacctgatc
cgttctctggaacaggagaaagcttcctaccagaagaccattgagcgcatgcgtagcagt
ttgccatcagaagccatggctgaggtggagatgacacaactcaagtccagcaataatggg
aaagccaaagctgcctgtaaaaagccttga
DBGET
integrated database retrieval system
