KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130094476
Entry
130094476         CDS       T09701                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130094476 (kdm4ab)
Enzymes [BR:rkg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130094476 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130094476 (kdm4ab)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130094476 (kdm4ab)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD PHD_4 Tudor_5 DUF7141 DUF2487 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 130094476
NCBI-ProteinID: XP_056116760
LinkDB
Position
Unknown
AA seq 1059 aa
MASDTPISRGIMTFYPTGEEFKNFSRYIAYMESQGAHKAGLAKIIPPKNWKPRRSYDDID
DLLIPAPIQQVVTGQSGLFTQYNIQKKSMTLKEFRKTANSDKFCSPRYDDFEELERKYWK
NVTFNPPIYGADVNGTLYDPDVKEWNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKT
TFAWHTEDMDLYSINYLHFGESKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMT
LISPSILRKYGIPFEKITQDAGEFMVTFPYSYHAGFNHGFNCAESTNFATRRWIDYGKQA
ILCSCRKDMVKISMDVFVRKFQPERYELWLAGKDNAPIDHSKPTPEAAEFLGGEAGKSGA
QELVENQSSEGQKKSLAKQRIGTKRHRVCLDLPEEVLPKSETNDEEAEYGKKGRLTPYIE
QCREYQELKDEDNLLPLTGSNNLKMLPGSRSPAFGERVRGAGCSAANPVTETTSLSSACV
QSFPKRHLSIASVPTVPHCLSAVPRISTKPGVASLLFHRTLSPSDALQVHSYATKSALSK
PEKPRTEKLREELREELKEPDIQLDVRPNTQTPRPNTQTPQPNTEHKIEGEKENKSMKRK
LQPLSKLPYLHPLLRENSSDDEIQEPAAEPEETNPWARLLAPMWQSKPRDFRVEKDFNFR
MGQQPPYCAVCALFHMYTQSDVIRLSQCGSAAEGGEQRTMPLIPEMCFTSSSEGRLSTPN
LDKDGTSQLVSCSVCSVRVHTSCYGLSRDTKLDGWMCSRCEANAITQDCCLCSLRGGALQ
KANNDKWVHVLCAVAVLEARFVNIAERSPVDLGKIPLQRFKLKCQYCRKWVKRSSSCCVQ
CSHGRCSSSFHATCAQAAGVQMHPDDWPFVVYFTCWRHKGGNQMERNKASMRELVKGQKV
ICKHRNMRYYHCEVVELTKATFYEVIFDDGSFSDNLFPEDIVNRDCLKLGPPSEGDVVQV
RWTDGLIYGAKFVSDHIIPMYQVEFEDDSQLTVKREDVYSLDEELPKRVKGRLSVASDMR
FKGVFVEKDVKQDSKRQRVINSRYREDYIEPVIYRTIME
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggcatcagacacgccgatttcgaggggtattatgaccttttaccccactggtgaagag
ttcaagaacttcagccgctacattgcgtacatggagtcccaaggtgcacacaaggcaggc
ctagccaagatcatcccacccaaaaactggaagcctcgacgttcatacgatgacattgac
gacctgctaatacctgcaccaattcagcaggttgtgactgggcagtcggggctgtttaca
cagtacaacatccagaagaaatccatgactctgaaagagttccgcaaaacagccaacagc
gacaagttttgcagccctcggtatgatgattttgaagagcttgaaaggaaatactggaaa
aatgtaacctttaaccctcccatctatggagctgatgtgaatgggactctgtatgacccg
gatgtcaaggaatggaatgtagggcatttgaataccatccttgacaccgtggagcatgaa
agtggtattactatagagggagtaaacacaccctacctctactttggcatgtggaaaacc
acttttgcttggcacactgaggacatggatctctacagcattaattacttacacttcggg
gaatcaaagtcctggtactgtgtgcctccagaacatggaaaaagactggagcggttagcc
aaaggctttttccctggaagttcacaaaactgtgaagcatttcttagacacaagatgact
cttatttcaccttcaattctaaggaagtatggcattccctttgaaaagatcactcaggat
gcaggagagttcatggtgacatttccatacagctatcatgcaggctttaatcatggcttt
aactgtgctgaatctactaactttgccacaaggcgatggatcgactatggaaaacaagcc
atactgtgttcatgtaggaaagacatggtgaagatctccatggatgtgtttgtaaggaaa
tttcagcccgaacgctacgagctgtggttggcggggaaggacaatgctcccattgaccac
tccaagcccacgcctgaagcagctgagtttttaggtggagaggctggaaagagtggtgct
caggaactcgttgagaaccaaagcagtgagggacaaaagaaaagcctggccaaacaaagg
ataggaaccaaaagacaccgagtgtgtctcgacttaccagaggaggttcttccaaagagt
gaaacaaacgacgaggaggctgaatatggaaagaaggggcgcttgactccatacatagaa
caatgcagagagtatcaagaattgaaggacgaagacaaccttctgccactgacaggttcg
aacaatttaaagatgcttccaggttccagaagtcctgcatttggggagcgtgttaggggt
gcgggttgtagtgctgcaaacccggtgactgaaactacttctctgtcctcagcctgtgtc
cagtccttcccaaagcgtcatctctctatagcatctgtccctactgtccctcactgcctg
tcagccgtgccacggatttctaccaaaccaggggtggcgagccttctctttcatcggacc
ctgagcccttcagatgccctacaggtccatagctatgcaaccaaatcagcgctcagtaaa
cccgagaaacccaggacagagaaactcagagaagaactcagagaagagctcaaagaacca
gacattcaactagatgtgaggccaaatacgcaaactccacggccaaatacgcaaactcca
caaccaaacacagagcataaaattgagggagagaaagagaataagagcatgaagaggaaa
ctgcagccactcagcaagttgccgtacttgcatcccctgctcagagagaactccagtgat
gacgagattcaggagccagcagcagagccagaggagaccaatccctgggccagactcctg
gctcccatgtggcaaagcaagcctcgcgattttagagttgagaaggatttcaacttccgc
atgggccagcaaccgccgtactgtgcagtgtgtgcactctttcacatgtacacacagagt
gatgtaatccgtctgagccagtgcggttctgcagctgaaggaggagagcagaggaccatg
ccgctgataccagagatgtgcttcaccagcagctctgagggacgcctgtccaccccgaat
ctggataaagatggcactagccaactcgtcagctgctctgtgtgtagtgtgcgcgtacac
accagttgttatggcctgtctcgggatactaagctggacgggtggatgtgttcccgctgt
gaagcgaacgccattactcaggactgctgtttatgctctctgagaggaggagctctgcag
aaggcaaacaatgacaagtgggttcatgtgttatgtgccgtggcagtgctggaggctcga
ttcgtgaacattgcagagcgcagtcctgttgatctcggtaaaatcccgcttcagagattt
aagctgaaatgccagtactgtcgtaagtgggtgaagaggagctcgagttgctgcgtgcag
tgctcacacggccgctgctcatcttcctttcacgccacctgtgcacaggcagccggggtt
caaatgcacccagacgattggccattcgttgtttacttcacctgctggagacacaagggc
ggcaaccaaatggagcgcaacaaggcatcaatgcgggagttggtgaaggggcagaaagtg
atctgcaagcacagaaatatgcgatactaccattgtgaggtggttgagctgaccaaagcc
accttctacgaggttatcttcgatgatggctcattcagtgacaacctcttccctgaggat
atagtgaatagagactgtctgaagctcggtccaccgtcagagggcgacgtagttcaagta
cgctggacagatggcctgatctatggagccaaatttgtgtctgaccatatcatcccaatg
taccaggtggaatttgaagatgactctcagcttactgtaaagagggaagacgtgtacagt
ttggacgaggagctgcccaaacgtgttaaaggccgcctgtctgtggcgtcggacatgcgc
ttcaaaggggtgtttgtggagaaggatgtgaagcaagactcgaaaagacagcgggtgatc
aactcccgttatagggaggactacatcgaaccggtcatctacagaaccatcatggagtaa

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