Rhinichthys klamathensis goyatoka (western speckled dace): 130094477
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Entry
130094477 CDS
T09701
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130094477 (pif1)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130094477 (pif1)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130094477 (pif1)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130094477 (pif1)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130094477 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
Herpes_Helicase
UvrD_C_2
Mg_chelatase
RsgA_GTPase
AAA_16
AAA_7
ABC_tran
AAA_5
PhoH
Motif
Other DBs
NCBI-GeneID:
130094477
NCBI-ProteinID:
XP_056116761
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MFFQGKMLGHVDPAELQCTVAVERLNPAGQAIKRQLMRKATVTLGRNEFQEMVLRVHDGK
APQNFMLRDFQLFTRFAKDGKCTVKFVPESTQVLVSDCPPDRLKVFLKTLSIKHQASQSN
KPMSGRAKLRAGLPRAFETVSPLQLKDVQKANELRSKVNTPIQPKGPSERPVNKVLGERK
QVKRPRPDCDTSPVKALHPNKKPVLVLPVAQKLSKEQTAVLNAVLSGKNVFFTGSAGTGK
SFLLKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCLELAQRPGVL
QHWTSCKHLIIDEISMVEAQFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGK
DKANFCFQSRSWRKCIHMNMELMEVRRQTDKAFISLLQAVRVGRVTEEVTAQLLRSANHC
IERDGILATRLCTHKDDVELTNENKLKHLPGAVRVFEAVDSDPMLVQTIDAQSPVSRLLQ
LKVGAQVMLTKNLDVQRGLVNGARGVVVDFQPGNQGLPRVRFLCGAVELMKRERWLFKAS
GGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVM
DFDPRVVQANQDVLLFYKRLRKERLLMQSSMNDFVGQSNKENYPW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcaaggtaaaatgttgggacacgttgatcccgctgagcttcagtgcaccgtg
gcagtggagcgcttgaatcctgcagggcaagccatcaaacggcagctcatgcgcaaagcc
actgtcacattagggcgcaacgagtttcaggagatggtcctgcgtgtccacgatggcaaa
gctcctcagaacttcatgctgcgcgatttccagctctttacgcgcttcgcaaaggatggt
aaatgtactgttaaattcgtcccggagagcacacaggttctagtctctgattgtccaccg
gatcgtttgaaggtgttcctcaagacgctcagcatcaaacatcaagcatcccaaagcaac
aagcctatgagtggtagggctaaactacgagccggccttcctagagcctttgagaccgtc
agtcctctccagctgaaagatgtacagaaagcaaacgagctgagaagtaaagtgaacacc
ccaattcaacccaaaggtccttcagagagacctgtcaataaggtcttgggtgaaaggaaa
caagtaaaaagacccagacctgattgtgacactagtccggttaaggcgcttcaccccaat
aagaagcctgtcttggttctgcccgtggcacaaaagctaagcaaagaacaaactgcagtt
ctcaatgcagtcttgagtggcaagaatgtgtttttcacaggcagtgcaggtacagggaag
tccttcttgctcaaaaggattgtaggctctctgcctccaaaaagcacatatgcaaccgcg
agcaccggcgtcgcagcctgtcacatcggagggaccacacttcacagttttgcaggtatt
gggtccggctctgctcctcttgaacagtgtcttgagctcgctcagcgtcctggggttctg
cagcactggacctcctgcaaacacctcattattgatgagatctcaatggtggaggcccag
ttctttgacaaactagaagccatagccaggtccatcagaagatcaactgagccatttgga
gggattcagctgattgtgtgcggagactttcttcaacttcctcctgtaacaaaaggaaag
gacaaagctaacttttgtttccagtcgagaagctggcggaagtgtatccacatgaacatg
gagctgatggaggtgcgcagacaaacagacaaggccttcatttctctcctccaggctgtg
agagtgggcagagtcacagaggaagttaccgcacagctgctgagaagtgccaatcactgc
atcgagagggatggtatcctagcaaccaggctgtgcacacacaaggatgatgtggagctc
accaatgagaataaactcaaacatttaccaggggccgtgagagtattcgaagctgtggat
agtgaccctatgctggttcagaccattgacgcccagagtccagtgagtcggctgttacag
ctcaaagtaggcgctcaggtcatgcttactaaaaacctggatgtccagaggggtctagtg
aatggagccagaggagtagtggttgactttcagccagggaatcaaggtctccctcgggtg
cgattcctctgcggggctgttgagttaatgaagagagagcgttggctttttaaagcgtcc
ggggggctgtacctgagccgacagcagctgccactcaaactggcctgggccatttcaatc
cacaagagtcagggcatgactttggattgcgtggagatctctttggcgcgtgtgtttgag
agcggccaggcttatgttgctctgtcacgggctcggagtctggaaggcctgcgtgtgatg
gactttgatcctcgagtggtgcaggccaaccaggacgtgctgctcttctataagagactg
aggaaagagaggctcctcatgcagtcctcgatgaatgactttgtgggacagagcaataag
gagaattacccttggtga
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