Rhinichthys klamathensis goyatoka (western speckled dace): 130094541
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Entry
130094541 CDS
T09701
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130094541 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130094541 (xpc)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130094541 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
130094541
NCBI-ProteinID:
XP_056116843
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MAKRKETQQKTDTKKPKQIAKKKPASKTLKNKENGIMDKNNRKNSRVTSRVSKKVKDASD
ERTSKYFRDSEVKTEEPEDMSDNSEEMSPSKQVKEEEEESEDEEDWEEVEEIAEPLGPVD
STELAELSKPVEIEIETPDMARKRQRKEKRKVEFETYLRRTVKRFNKELLVDTHKVHLLC
LLAGGLFRNRLVCEPDLLAIALSILPAHFTTVAIKRINTGFLEGLLKWFQGTFTLNPALP
DEKGVELRTVLEKRIGCLSARDHEEMTYLFLLVLRSLRLFCRLVLSLQPLPLKPPPATKN
KTTPTKSSPEKDQSEKPSPKPKISSGSKRPSSATAAVKDERGGKRKKKKEKGGEKEAAGG
LKPKNSRRRSVASKVSYKEASSEEEEEQSEEEFQPTNEDDSEDSDGPMKVRRKSKLKGKG
GAPRSSNEVKQEERSEEEEEGEEEKERKKQRRKRKEGKGVDEWLEVYLESTGRWVCVDVN
QRVGQLCSDQATQPITYVVGVDDEGYLKDLSSRYDPTWLTSSRRRRVDSEWWEETMELYK
SPDTEREQKEDQEMQAKLLNKPLPTSIAEYKNHPLYVLKRHLLKYEALYPSTAAILGYCR
GEPVYARDCVQTLHSRDTWLKEARTVRLGEEPYKMVVGFSNRSRKARMMSEQKGVKDLPL
FGVWQTEEYQPPIAVDGKVPRNEFGNVYMFKSCMLPVGCVHLHLPNLHRVARKLNIDCAT
AVTGFDYHCGFAHAVNDGYIVCEEHQEILKAAWENEQDIQQKKDQEKREKRVVANWTLLV
KGLLIKERLKRRYGQQGLASRTELMQGKEGLAEGLSSDEEEEGRDQKAPPSLASSWPQNR
QQEQEEKIVRRVTKREKRGEQKNLFPFEKV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaaaagagacacagcagaaaacggacacaaagaaaccgaagcagattgca
aagaaaaaaccggcatccaaaaccctaaaaaacaaagaaaatggtattatggacaaaaac
aaccgcaaaaactccagggtgacgtcccgtgtgtccaaaaaggtcaaagatgcctctgac
gaaaggacaagcaagtacttccgggacagtgaagttaaaactgaagagccagaggacatg
agtgacaacagtgaggagatgagcccatcaaaacaagtgaaagaagaagaggaagagagt
gaagatgaggaggactgggaggaagtggaagagatagcagaaccgctgggtcctgtggac
tcgacagaactagcagaactgtcaaaacctgtggagattgagatcgagactccagacatg
gctcgcaagaggcagaggaaggagaaaaggaaggtagagtttgaaacttatctgcgtcga
acggtaaaacgatttaacaaggagctgctggtggatacccacaaggttcatttgctttgc
ttattggctggcggtttgtttcgaaacagactcgtctgtgagcctgacctgttggctatt
gccttgtcaatactgcctgcccactttaccacagttgctataaaacgcataaacactggc
ttcctggaggggcttctcaaatggtttcaagggacgtttacattaaaccccgccttacct
gatgagaagggagtggagttgaggacagtgctggaaaaacgaattggctgtttatcagca
agggaccatgaggagatgacctatctgttcttattggtcctgcggtcattgcgactcttc
tgtcgcttggtgctgtctttacaacctcttcctctgaagccaccacctgctaccaagaac
aagaccacacctaccaagagctctccagagaaagatcaatcagagaaaccctccccaaag
cctaagatatcctctggatccaaacgcccatcatcagcgactgctgcagtaaaagatgaa
agaggcggaaagagaaagaaaaagaaagagaaaggaggagagaaagaggctgcagggggc
ctgaaacccaaaaacagcagaagaagaagtgtagcttcaaaagtgtcctacaaagaagcc
agcagcgaggaggaggaggaacagagtgaagaggagtttcagccaaccaatgaggatgac
agtgaagactccgacggacccatgaaagtacgcagaaaatcaaagttgaaaggcaaaggt
ggggctcctcggagttcgaacgaggtcaaacaggaggagagaagtgaagaggaagaagag
ggggaggaagagaaagagagaaagaaacaaagacgtaaaagaaaagaggggaaaggggtg
gatgagtggttggaggtttatttggaaagtactgggaggtgggtgtgtgttgatgtgaat
caaagagtcggccaactctgttccgatcaggcgactcaaccgatcacttatgtggtgggc
gtggatgacgaagggtacctgaaagatcttagcagcaggtatgaccccacgtggctgaca
tcatcacggcgacggcgcgtcgactccgaatggtgggaagagactatggagctctacaag
tccccagatactgaacgagaacagaaagaggatcaggagatgcaggctaagttactgaac
aagccattgccgacatccatcgcagaatataagaaccatccactgtacgtgcttaagagg
cacctgcttaaatacgaggccctctacccctctacagccgctatcctggggtactgcaga
ggagaaccagtttatgcacgagactgtgtgcagacgctccattctagagatacctggttg
aaggaagcacgaacagttcgactaggagaagagccatacaagatggtggttggtttttcc
aatcgttctcgtaaggccaggatgatgtcagagcagaaaggtgtcaaagatctgcctctt
tttggagtctggcaaactgaagagtaccagcctccgatcgccgttgatggcaaagtacca
cgtaatgagttcgggaatgtgtacatgtttaagtcgtgcatgttaccagtaggatgtgtt
cacctgcatttgccaaatctgcacagagtggctcgaaaactgaacatagactgtgctaca
gcagtgacgggttttgattaccattgtggatttgcacatgcagttaacgatggctatatt
gtctgcgaagaacaccaagaaatcctgaaagcagcctgggaaaatgagcaagatatccag
cagaagaaagatcaagagaaacgtgagaagcgtgtagtggctaactggaccctgctggtc
aaaggcctgttgattaaagagaggctgaagcgtcgctatgggcaacaggggctcgcatcg
aggacggagcttatgcaaggcaaagaaggcttggctgaagggctgtcctccgatgaggag
gaagagggcagggatcagaaagctccaccctctctggctagttcatggccgcagaacagg
caacaggaacaagaggaaaagattgtaaggcgtgtaactaaacgagagaaacgcggagag
cagaaaaatctcttcccttttgaaaaagtgtga
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