Rhinichthys klamathensis goyatoka (western speckled dace): 130094608
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Entry
130094608 CDS
T09701
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130094608 (sort1b)
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
130094608
NCBI-ProteinID:
XP_056116948
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All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MRGLGHFIALLFFPMAFCVDFHVEPGSYKAHRVYVKSPVAARSLIGTGSDADISRIHSHI
QKRSADELDSCNGLKEYETKLTSNTHNWTFKDISGSVSLAWVGDGTGVVLALTTFQVPLV
FLRFGQSKLYRSENYGKSFEDVTELINNTFISTDFGIAIGPENSGKVILTGDASGGTGAR
IFRSKDFAKSFIHTELPFQPLMQIMYNPQNSDVLAVISIKNDLWISKDFGTTWTKIHEMV
CVVKWGMDTLFFSVNLNGSCIDKGTLVLRKSVDLSVNFKTVAERIYSFGIGGRFLFASVM
AGSGNIMPSASEDILRAIHVSVDQGETWNMAQLPPVSHEQFYSILAANDEMVFMHVDEPG
DEGIGTIYVSDDRGTVYSKSLERHLYTTPGGETDFTNVTSLRGVFTTSVLNEDNSVQTVI
SFDQGGEWVPLKKPENSKCDSTAKDKEMCSLHIHASYSTSMKLNVPMLPLSEPNAVGLIL
AHGSVGDSISMLTPDVYVSDDGGYTWQQALKGPHYYAILDSGGLLVAVEHNEQNPSKLIS
EIKFSTDEGQCWHVYKFTQTPMYFTGLASEPGARSVNVSLWGYEDALISHWVTYTIDFRD
LLTRDCTESDYVQWLAHSDDISDPEDGCMLGYKEKFLRVRKDSVCWIGRDYIVTKQPTPC
SCTLDDFLCDFGYYRKENSSECVEQAELKGHDLEICIHGREEQLQTSGYRKIPGDKCEGG
KQPGRKVIDMSKRCVSNLLADPQLLTEKSTSHTAPIIAIVIAILLTGAVFGVLFVKKYVC
GGRFLVHRYSVLQHNAEANAVDEPLDTDVAGAPKIDFHDDSDEDLLE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccttggacactttattgcacttttattttttcccatggcattttgtgtggat
ttccatgtggaaccaggatcctataaagcgcaccgggtgtatgtaaagtctcctgtagcc
gccagaagtctgatcgggacgggatcggatgcagatatttcgcggattcacagtcacatc
cagaaaagaagcgctgatgaattagactcctgtaatggtttaaaggaatatgaaaccaag
ttaactagcaacacacacaactggacttttaaagatatcagtggatccgtgtctctggcc
tgggtgggggacggaactggggtagtactagccctgacaacatttcaggtgccattagtc
ttcctgcgatttggtcagtctaaactgtataggagtgaaaactatggaaagtcatttgag
gatgtcacagaactcatcaacaacaccttcatcagcactgactttgggatcgctattggt
ccggaaaactctggcaaggtgatcctcacaggagatgcttctggaggcactggtgccaga
attttccgttcaaaagactttgccaagagtttcatccacacagaactgcccttccagcct
ctaatgcagataatgtacaaccctcaaaactctgatgtgcttgcagtcatcagcatcaag
aatgatctctggatctctaaagattttggtacaacatggacgaaaattcatgagatggtg
tgtgtggtgaaatggggaatggatactctattcttctccgtcaaccttaatggatcctgc
attgataaaggaacgctggtgctgaggaagtcagttgatcttagtgttaactttaaaaca
gtcgccgagagaatctactcctttgggattggtggacgcttcctgtttgcttcagttatg
gctggatcaggaaacattatgccgtcagcatcagaggacattttacgtgcaatacatgtg
tcggtagaccaaggtgagacatggaacatggcgcaacttcctcctgtcagtcatgagcag
ttttactcaatacttgcagccaatgatgaaatggtcttcatgcatgtggatgaaccagga
gacgaggggattggcaccatctatgtgtcagatgacagaggcactgtgtattccaagtct
ctagaacgccatctgtatacgactccagggggtgagacagacttcacgaatgtcacttcc
ctaagaggagtcttcactaccagcgtgctgaatgaggacaactcggtacagacagtaata
tcatttgatcagggaggtgaatgggttcctttgaagaaacctgagaacagcaagtgtgat
tctacggccaaagataaagaaatgtgtagtctgcatattcatgcctcatatagcacctcc
atgaagctgaatgttcccatgctgcctctgagtgaacccaatgctgtcggactcatcttg
gctcatggcagcgtgggtgactcaatctcaatgttgacacctgatgtgtatgtgtctgat
gatggaggctacacctggcagcaggctctgaaggggccgcattactatgctatcctggat
tcaggaggcctgctggtggccgtggagcacaacgagcaaaacccatccaaactcatctct
gagattaagttctccaccgatgaggggcaatgctggcatgtttataagttcacccagacg
ccgatgtacttcacagggctggcctcagagcctggtgcccgctcagtgaatgtcagtctc
tggggttatgaagatgctttgatcagccactgggtaacttacaccattgactttagagac
ctgctgacacgtgactgcacagaaagtgattatgtccagtggctggctcactctgatgac
atcagcgacccggaagatggttgcatgctgggttataaggaaaaattcctgcgtgtgaga
aaggactctgtgtgttggattggcagggattacatagtcaccaaacagcccacaccatgc
agctgcacactggatgacttcctgtgtgactttggatactaccgtaaagagaacagctca
gaatgtgttgagcaggctgagctcaaaggccacgatcttgagatctgcatccacgggaga
gaggaacagctacagaccagtgggtacagaaagattccaggtgataaatgtgagggagga
aaacaaccaggaagaaaagtgattgacatgagcaagagatgtgtcagcaacctgctggcg
gaccctcagctgctgacagaaaaatctacctcacataccgcccccatcattgcgatcgtc
atagccatcctgctgaccggtgcagtgtttggggttctgtttgtaaagaagtatgtctgt
ggcggaaggttcctggtacatagatactcagtcttacaacataatgcggaagccaacgcc
gtagatgaaccactggacacagatgtggctggagcacctaagattgatttccatgatgac
tcagatgaggacctactggagtaa
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