Rhinichthys klamathensis goyatoka (western speckled dace): 130094686
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Entry
130094686 CDS
T09701
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130094686 (apex2)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130094686 (apex2)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130094686 (apex2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
130094686
NCBI-ProteinID:
XP_056117084
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRGGYSGVATYCKDTATPFLAEEGLTGLIANQGEAVGCYGDQLELSSDELLALDNEGRAV
ITQHHFMGRDGPQKLTVINVYCPRADPDKPERKQYKLQFYQLLQCRAEAILSSGSHVIVL
GDVNTSHRPIDHCNPDDVDNFEDNPGRKWLDHFLFETEENTENGNTEDDLADISQNSASG
GKFVDSFRHFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSDRPLVETGFIGVDIMPEVE
GSDHCPVWAQLSCTLQFSPKCPPLCTRHMPEFIGKQQKLSRFLVKVPEKQSVSKGSVESL
PGSQDAGEIRENLNPVVQGNSVAKKRPTDREADTNGHKAKRSKQTKTESNAKGSLLAFFK
PKQTLLIPSRGNLGLKQAESSQDGPGSESNTRSCPSDAQKETNLSKLTEMENENQDEVEG
ESTSIDKSKDCKKGPCTGFWKTVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCA
RPQGHASNAQARCNFFAWVEKGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacatggaacataaacgggatacgaacatttaaaaatggtatcaagaaa
attctggattcatttgatgccgatataatctgcgttcaagagactaaagttacccgtgac
ctgttggatgagaaaacagcgattgttgatggctacaattcatactttagttttagccga
ggacgaggtggatactcaggtgtcgcgacctactgtaaagataccgctactccattcctg
gccgaggaaggattgacaggtctgatcgccaatcagggagaggctgttggttgctatggt
gaccagttagagttgtccagtgatgagcttctggcactagacaatgaaggaagggctgtc
atcacccagcatcacttcatggggagagatggaccacagaagctgactgttatcaatgtt
tattgtcctcgagctgacccggacaaacctgagagaaaacagtacaagctgcagttttac
caactcctccagtgcagagctgaagccatcttgagctcggggagtcatgtgatcgttttg
ggtgatgtgaacacctctcacagacccatagaccactgcaacccagatgatgtggataac
tttgaagataatcctgggaggaagtggctggatcatttcctgtttgaaacagaagaaaat
acagaaaatggaaatactgaagatgatcttgcagacatctcccagaattctgcctctggt
ggcaagtttgtggactctttccgccattttcacccaaagcgctccaatgccttcacgtgc
tggtctacactcacgggtgccaggcagaccaactacggcacacgcatcgactacatcttc
tctgaccgccctctggtggagacgggctttattggcgtggacattatgccagaggtggag
ggatccgatcattgtcctgtatgggcgcagctcagctgtaccctccagtttagtccgaag
tgcccgcccctgtgcacacggcacatgccagagttcattggcaaacagcagaaactttca
cgcttcttagtaaaagttcctgagaaacagagcgtttctaaagggagtgtagagagtcta
cctggatcacaggatgctggggaaattcgggaaaacctgaatcctgtggtacaggggaac
agtgttgcaaagaagagacctacagatagagaagcagacacaaatggacacaaagccaaa
agaagcaagcagacgaaaacggaaagtaatgctaaaggaagtcttttagctttctttaag
cctaaacaaacactgttgataccttcaagggggaacttgggcttaaaacaggcagaatcc
tctcaggatggccctggtagtgagagcaacactagaagctgccccagtgatgcgcaaaag
gagacaaatctctccaagttaacggagatggagaatgaaaatcaggatgaagtggaagga
gaatctacatccatagacaagtcaaaggactgtaagaaagggccatgcactggtttttgg
aaaactgttttgcatgggcctcctcagccgccactttgtaaatcacacaatgagccctgt
gttttaaggactgtgaaaaaagcaggacctaatctaggccggcagttttttgtatgtgcc
cgtcctcaaggccatgcctccaatgctcaggccaggtgtaattttttcgcctgggtagaa
aaaggaaaatag
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