Rhinichthys klamathensis goyatoka (western speckled dace): 130094700
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Entry
130094700 CDS
T09701
Name
(RefSeq) nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130094700
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
130094700
BRITE hierarchy
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Other DBs
NCBI-GeneID:
130094700
NCBI-ProteinID:
XP_056117097
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Position
Unknown
AA seq
1424 aa
AA seq
DB search
MSDWKNAFERNRVIPPHSQTARQAPGSPQGLQLHLKQIDGLHIRQSELPQSLQYQLRVTL
FDSGHQHFFGRTWKSRSHSLGGTSGQSSRVLFNEVVYFHTSLCLNTVVAVVELVCTRADG
SQDAVGSGFGLLQLFTGRADSSISQGEGRLSLFNGTPRALLHPMLKDPLQLNAVLSVMEG
SQLLYSIQPHPALTPIMHLLPPNILVSGHDRIPGVVFSTDTGTDALRKPRLLKSFSCVLE
GLRVALFPSVEVFESDLLQLLNRDCQNTNRGAEGRSVVVQERRLLVGVHNGWGWVEKPHV
LVLECEATGSGAARARGASAGGGFRQTSTDKLSDGLCLRGSVELKMMRDTVFSIVFQLQY
VFSCPLVGDGQMTSTAVHRAAFMQCVRWCAWSLFSDPEGPGENVCLNLQGGALPNPWGVM
VYSASTQQTNSGKCVIKFKFSSSVEGAPCSTTLKGSHRETSPPKKLLSATQDERILEPTA
STLQSSRGPALSLSQLVATSRYPTMSHTVGSPWQQQLPSQLSPSPMASAHQLSHVERPVA
SSIAHLELSVQEREGDRSEEEDEMQELTFTPVHAPVITLGTHSAGSSRSTSRRSLAQLFS
SGFPQILDHQNQVAEVLDPSEPVNFDLQREEADHLQVNTLILQFLAFTRVPQTGVNSDWP
SSVHFTFQLYRFQPVTTERLKLLEPERNSKLKSNPHYPCVLSLINKDGTLNSGFPGLQLQ
YRVDPQFLKPGERGWFLRYLALHSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQVSH
ELEVITTEYLQDANFASRHDSKHSASPAINVYTTVKGILHLRLGNVGGSVSSSQSSLALP
PSLSHVVQPSDASRGFAGGSVPALTVLQLNASNARRARRLPEIDSELARLLQSTMREVGG
AALHQQDEVKEVRQRKIDRMAAVRQHEQQKATPPFQDHANMTRHRTERVQHSRDLRVIEA
YRERCKAQEITNMLSQAITTKHTLYATLGTAEFFEFVLKNPFNVSQTVTIECDDPELSVI
VKSEEWRYFKELTKTLTPLEEEMFHLKESTLTPQVYLRPKESVHIPFKYQTFVCGRTLPL
QDTKSLKISRSPQMAQKHLSNTIQAKSIKVLFRGEDRKPLAICQVDVEPTPHVVDQTFRF
YHPELTFLKKAIRLPAAWDDTADGSATLHVRCSDPNVICHTTSLTPKEPQDVYLKVPGSP
SPQIRKFFISIFTEPWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVLRGTQAIRRVK
CYTSPPLELQVDPVEVFALPAQGIQDIHVGLRALRPGSRFFYLNVVDVDTRQLVASWLLC
ITCRQPVISKAFEINVPVDGGKGSNKKISFTNPYSSSRVFNLRTDRPDLLRFKEEQFQIG
GGEPYTIGLRFAPSQNPGMEEILIFINDKQDKNEDTYCVRVQYR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactggaaaaacgctttcgagagaaaccgagtgatcccacctcacagtcaaacc
gccagacaagctccaggatctcctcaaggtctacagctgcacctcaaacaaatcgatgga
cttcacataagacagtcagagttgccacaatcactccagtatcagctgcgtgtgaccctg
tttgactcgggtcaccagcacttcttcggccgcacatggaagagcagatcacactctctc
ggtggcacgtcaggtcagagcagtcgagtgcttttcaatgaggtggtttacttccacact
tccctgtgtttgaacactgtggtggcagtggtggagttggtgtgtaccagggcagacggt
tcccaggatgcagtggggtcagggtttggactcctccagctcttcacaggccgtgcagac
tccagcatctctcagggagagggcaggttgagtcttttcaatggaacccccagagccctc
ctgcacccaatgctgaaagaccctctgcagttgaatgctgttttatcagtgatggagggc
tctcagctgctctactccatacagccacacccagctctcactcccatcatgcacctgctc
ccaccaaacattctagtatctggacatgaccgcatccctggcgttgtgttctccacggac
acaggcacagatgcactgcggaagcctcgtctgttgaagagcttctcgtgtgtgttggag
ggcctacgtgtggcactcttcccctccgtggaggtcttcgaatctgacctgctccagctg
ctcaacagagactgccagaatacaaacaggggtgcggagggacgctcggttgtggtgcag
gagcgcaggctgctggtgggggtccataacggctggggttgggtggagaagcctcatgtg
ttggtgttggaatgtgaggccacagggagcggagcagccagggctcgcggagccagcgca
ggcggaggcttcaggcagacctccacggacaaactcagtgatggactatgtcttcgtggc
agtgtggagctgaagatgatgagggacacggttttcagcatcgtcttccagctccagtat
gttttctcttgtccactggttggagatgggcagatgacatccacagctgtgcacagagca
gcgtttatgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcctgagggtccc
ggagagaacgtgtgcctcaacttgcagggcggtgctctccccaacccttggggtgtcatg
gtctactctgcaagcacacagcagacaaattcaggaaaatgtgtcatcaagttcaagttt
tcatctagtgtggaaggagctccttgcagcacgacattaaaagggagccaccgggaaacg
tcgccacctaagaagttactttcagcaacccaagatgaacgcatcttggagccgacggct
tcgacgctgcagtcttcacgcggcccagcgctgtctctctctcagctggttgcgacttca
cgctacccgaccatgagccacacggtggggtctccatggcaacaacagctcccctctcag
ctctctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgtccagttgcc
agcagcatagctcacctggagctgagtgtgcaggagagagagggagacagaagtgaggaa
gaggatgagatgcaggagctgaccttcaccccagtgcatgcccctgtcatcacccttgga
acacactctgctggctcttccagatcgacctcccggagatctttggcccagctcttctcc
tctggttttcctcagatcctggaccatcagaaccaggtggctgaggttttggatccttct
gagccggtcaactttgacctccagagagaagaagcagatcatctgcaggtcaacactctc
atcctgcagttcctggcctttaccagggtccctcaaactggtgtgaattcagactggccc
agctctgtccatttcactttccagctttaccgcttccagcctgtcaccacagagcgtctg
aagctgcttgagccggagagaaacagcaagctcaaatccaatcctcattacccctgtgtc
ctctcccttatcaacaaggacggcacacttaactctggttttcctggtctgcagctgcag
taccgagttgacccgcagttcctcaagccaggtgagcgggggtggttcctgcgatacctg
gcgctccactccctgcagattgatgtctgggacagtgaatccttaatgctgattggctca
gctgctgtggagctgaagcatatgctacgtcaaggccgtgcagccgtccaggtgagccat
gagctggaagtgatcactactgagtacctgcaggatgccaactttgccagcaggcatgac
agcaagcacagcgcctctccagccatcaatgtctacactaccgtaaaaggaattctgcat
ttgcggcttggaaacgttggtggcagtgtgtcgagttcccagagttctttggctcttcct
ccatcgctctcccatgtggtccagcccagcgatgcctcccgtggttttgcgggaggaagt
gtccctgctttaacggttctccagcttaacgcgagcaatgccagacgagcccgccgattg
ccagaaattgacagcgagctggccagacttctacaaagcaccatgagggaagtgggtgga
gccgcactgcatcagcaggacgaagtgaaggaagtgcgccagaggaagattgacagaatg
gcagctgtccgtcaacatgagcagcagaaggccacgcccccttttcaggaccacgcaaac
atgacaaggcatcggaccgagcgggtgcagcattcccgtgatctgcgtgtgatcgaggct
tatcgtgaacgctgtaaagcacaggagatcaccaacatgctctctcaagccatcactacc
aaacacactctgtacgccacacttggaacagctgagttcttcgaatttgtgctcaagaat
ccattcaacgtttctcagacagtcaccattgaatgcgatgacccagagctcagtgtaatc
gtgaagagcgaggagtggagatattttaaggagttgacgaagactctgactcctctagag
gaggagatgtttcacctaaaggagagcacactgacaccacaggtttacctgcggcccaaa
gaaagcgtccacatccccttcaagtaccagaccttcgtctgtggtcgcaccctccctctt
caggatacaaagagcttaaagatttcaagaagtccacagatggctcagaaacatctgtcc
aatacaattcaagccaaatccatcaaggtgttgttccgtggggaagacagaaagcctctg
gcgatctgccaggtggatgttgaaccgacgccacatgtggtggaccagaccttccgcttc
taccatcctgaactcaccttcctaaagaaggctattcgcctgcctgcagcctgggacgac
acagcagatggttccgccacccttcatgtgcgttgcagcgaccccaatgtcatctgccac
accaccagcctgactccaaaagaaccgcaggatgtttacctgaaagtacctggaagccca
agtccacagataaggaaattcttcattagcattttcactgaaccttggctggcctcccct
gcgcagatctggcaggtatacgtgcattacctgcaaaggatggacctgagctgtgtgtgc
ggcactctgagctggcattcgctggttctgcgcggcacacaagctattcgcagggtcaag
tgctacacgtcgcctcccctcgagcttcaggtggatccagttgaggtttttgctcttcct
gctcagggaattcaagatatccatgtagggctgagggctctgcgccctggaagccgtttc
ttttacctcaacgtagtcgatgtggacacacggcagctagtcgcctcctggttgctgtgc
ataacatgccgacagcctgtaatatccaaggcatttgaaatcaacgttcctgtagacgga
gggaagggcagcaataagaaaatcagtttcacaaacccctactcttcctctagggtattc
aatctccgcacagaccgcccagacctgcttcggtttaaagaggagcaatttcagattggg
ggaggggaaccctacaccatcggcctgcgctttgctccaagtcagaaccccggcatggaa
gagattctcatcttcatcaatgacaaacaggataagaacgaggacacttactgtgttagg
gttcagtacagataa
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