Rhinichthys klamathensis goyatoka (western speckled dace): 130094738
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Entry
130094738 CDS
T09701
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130094738 (zc3h18)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
General mRNP proteins
130094738 (zc3h18)
BRITE hierarchy
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130094738
NCBI-ProteinID:
XP_056117136
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MDTPESPTQSPQSPEEEEKGLSDNELLESPESPAEVDKGVSDSELLNDDENEAQGGGGDS
DFEDGDRVATGGEDPEDISDLEDYKIDREEREDVHQQNLGLTVRGSRRNAILEEEEEEIL
ETPRSPDPDSPGPEHELPFTPAEEERDEEDESNTKPGRPELEEEEDDEEEERRRRRRAAM
VVSDLKDESSVSRDLDEHELDYDEEVPEEISAAAPEEDDAEKGPAGEDGEDEEEDDEEEE
KRRKKKERKPILPPDKDTPLRNSREDSRERGRRDSFRDKKKEEDDGEIDEGEIDDDDLEE
GEVKDPMDRKIRPRPICRFFMKGNCTWGMICRFIHPGVNDKGNYSLISKPDPFSPNGAPP
GGGGGGPHPLMPANPWGTPAAEELPPPPPPLDPPVESAWERGLRHAKEVLKKATIRKEQE
PDFEEKRFTVTIGEDDRDFDKENDFFRERGYRITREIREAGDIEFRDPAYGDPYGDPYYD
YEMEAFWRGGQYENFRVQYTETPLPYYPDRERERDPRERHRERERENERDHRERERRQRE
REREREREREKESRRRKEEWERDRLKRDEKEGRPRERPPREPREKKDEKEKPLKPRSPTN
MPPRGPLEPPTKKEMVPLAKRPDEWKDPWRRSKSPRRRPGLMGSPPRGRRRHRPSGSSVS
LSNSSRSSSRSSSFTGSGSSRSRSRSRSSSMSSYSSHSSQHSSFSGSRSRSRSFSSSPSP
TPSAQRNANKNKAEQPPVAVKGHPLKPGALPPPRREKGPPKMMPSPLLPEQPGKPPKPIT
EAGKPPNPRPAGRPPGPREPREPPNMREGRKKERQQHNPPQRYSTLSGSVSASSLSGSSS
KSHSSSASLSRSRSGSHKSRSLSVSSVSSVSSASSSSSSVRSADSEDMYADLASPVSSAS
SRSPTPGHARKERGPPRDRGPNKDRGKPPKKEEPFRDERKRVDPSGLPPKTSSGMPRSGN
RGHPMHPPPMGPPGGYGSHKDIKLTLLNKQQTDRGNRKRYFPADKERPPSPLSKRIALSP
DRGRDRRMPGRPPLSPRMDRPKGQGPRPMPPQGERKRPLSPPPKSSGKGPAAVSAGKPPA
PGAGSGSGSASSSGSGKPSSTLSRREELLKQLKAVEDAIARKRAKIPGK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcctgagagccccacccagtccccacaatctcccgaggaggaagagaagggt
ctctctgacaacgagctgctggagtcgcctgagtccccagcagaagtagacaagggagtg
tcagacagtgagctcttgaatgatgatgaaaatgaagcacagggtggaggaggagactca
gattttgaggatggagacagagtagctactggtggagaagatccagaggatatttcagac
ctggaagactacaagattgaccgggaggagagggaagatgtccaccaacaaaaccttggt
ttgacggtccgaggaagcaggcggaatgctatcctggaggaggaagaggaagaaatcctt
gagacgccaagatcaccggatcctgactcaccgggcccagaacacgagctacctttcacc
ccggcggaggaggaacgagacgaggaggatgagtcaaacaccaagcctggccgtccagag
cttgaggaagaggaggatgatgaggaagaagagaggaggaggcgaaggagggcggcgatg
gtagtgagtgatttgaaggacgaatcttctgtgtccagagatctggatgaacatgagctg
gattatgacgaggaggttccagaagagattagcgctgctgctcctgaggaggacgatgca
gagaagggtccagctggggaggatggagaagacgaggaagaggatgatgaagaagaggag
aagagacggaagaaaaaggaaagaaaaccaattctgcctccagataaagacacaccactg
agaaactcaagggaagactcacgggaaagaggcaggagagattctttccgggataaaaag
aaagaggaagatgatggagagattgatgagggagagatagatgatgatgaccttgaagaa
ggggaggttaaggaccccatggacagaaagatccgaccccgacctatctgcaggtttttc
atgaaaggtaactgcacatggggcatgatctgtaggttcatccatccaggagtcaatgat
aaaggcaattactccctcatctccaagccagaccccttctctcctaacggagctcctcct
ggaggaggaggaggaggacctcaccccctcatgcctgctaacccctggggaacccctgcc
gcagaagagttgcctccccctccgccgcctctagatcctccggtggagagcgcctgggaa
agaggtcttagacatgccaaagaggtgttgaagaaagccaccatccgtaaagagcaggaa
ccagatttcgaggaaaaacgttttaccgtaaccataggtgaagatgatcgagactttgac
aaagaaaacgacttcttccgggaacgtggatatcgtataaccagagagatcagagaagct
ggtgatattgagttcagagatccagcttacggtgatccttatggtgacccatactacgat
tatgagatggaagctttttggcgaggaggccagtatgagaatttccgagtgcagtacaca
gagaccccactgccgtactaccctgaccgagagcgggagcgtgatccacgcgagcgccac
cgggagagggaacgggagaacgagagagaccaccgtgagagggagcgcaggcagagagag
cgggaaagggagagagagcgggaacgggagaaagagagccggcgaaggaaggaggaatgg
gaaagagatcgtctgaaacgggacgaaaaggagggaaggccaagagagcggcctcccaga
gagccacgggagaaaaaggatgagaaggagaagccactcaaaccacgttcgcccacaaac
atgccacccagagggccattagagccaccaacaaagaaggagatggtgccactggccaag
aggccagatgaatggaaggacccctggcgcaggtctaaatcccctaggagaagacctggt
ctcatgggttcccctccccgtggccgcaggcgacacaggccctctggatcttcagtttct
ctttccaattcatctaggtcttcatcccggtcctcatcgttcacgggttctggctcttcc
cgttcccgatctcgttcacggtcttcttcaatgagttcctactcaagtcactcctctcag
cacagctctttcagtggaagccgctctagatcgcgatccttctcttcctcaccctcacca
accccctcggcacaaagaaacgctaataaaaacaaagctgagcagcctcctgttgcagtg
aaaggccacccgttgaagcctggtgcactgccccctcctcgcagggagaaaggacctccc
aaaatgatgcccagtcccttgttgcctgaacagccagggaaaccacccaagccaatcaca
gaggcaggaaagccccccaacccccgtccagctggaagacctcctggacccagagaaccg
agagaaccccccaacatgagagaaggacgtaagaaagaacgtcaacagcacaacccacct
caaaggtacagcacactgagtggcagtgtaagtgccagcagtttatctggctccagctca
aaatcccattcctcctccgcctcactctcccggtcccgttccggatcgcacaagtctagg
tctctgtcggtcagtagcgtgtcatctgtatcgtcggcctcatccagcagtagctcggtc
aggagcgctgactcagaagacatgtacgctgacctggccagccccgtgtcttccgccagc
tcccgatcacccactccaggccatgcccgcaaagaaaggggccctccacgggacaggggg
cccaacaaagacagaggaaaacctccaaagaaagaagagcctttcagagatgagcggaaa
cgagtggacccctccggtctcccccccaaaaccagctctggcatgcctagatctgggaac
agaggtcaccccatgcacccgccgcctatgggtcctccaggaggatacggctctcacaag
gacatcaaactcaccctgttaaacaagcagcaaaccgacagaggcaataggaaaaggtac
tttcctgccgataaagagcgacccccttcgcctctcagcaagaggatagcgctgtcacct
gacagaggtcgagacaggagaatgcctggacgacccccgttgtctcccagaatggatcgg
cccaaaggccagggtcctcggcccatgcctccacaaggagaaaggaagcgtcctctatct
cctccacccaagtcttctgggaaaggccctgctgccgtgtctgcaggtaaacctcctgcg
cccggggccggatccggttctggctccgcttctagttctggctcaggcaagccgagcagc
accctttctcgccgcgaggagctgctgaaacagctaaaggctgtcgaggacgccatagcc
cgcaaaagggccaaaatccctgggaaataa
DBGET
integrated database retrieval system
