Rhinichthys klamathensis goyatoka (western speckled dace): 130094779
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Entry
130094779 CDS
T09701
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130094779 (ppfibp1b)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130094779 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
ATG16
FlaF
Spc29
Motif
Other DBs
NCBI-GeneID:
130094779
NCBI-ProteinID:
XP_056117206
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALDYSNGIFDCQSPTSPFMGSLRALNLLEDLRGVLE
LMDTEEREGLRCQIPDSTADSLLEWLHGHLSNGHISITGDVYQDRLNRLESDKESLVLQV
SVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRSALETQKLELMAEVSNLK
LKLTAMEKHRLDFDDRFGDSEGLILEINELRYRISEMESERLQYEKKLKSTKSLMAKLSS
LKLKMGQMQYEKQRKEQKIQELKEELVTLRRQLDGRDGDLRRLQDETGSRSPTPAGLDGT
ERVFHTEETLKKRLKEKHMEVQRMKKAMESLMAANEEKDRKIEELRQSLMRYKKVQEMVM
SAQGRKDKVKDGDSDESNSDSSLSMSTALSVSMDTEKSLLAYTEEVAVRGQNEAATFVST
FQVPSFTVSSPDKADSDSVLEHMQSSSDKECQEPTQSQETPLHESPETSEVTKSASQDNL
DGKASEKSKAFNEFNKITTLPPKSPCSSCTAEDDSFGTRKMRSSFGRGFFKIKGGKRTAS
APNLAETERDGTDHLDLAGMPQRSADSDSTHTLPISPEGKKKSKGIKALFGKLKRSQSTT
FNLDDNLSESEFKRGGVRATAGPRLGWSRDLQNTNSELDAPFARWSREQVCDWMQEQGLG
LYVSLARQWISSGQTLLQASQQDLEREMGIKHPLHRKKLQLALQALGSEEDDNKGKLDYH
WVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLN
NYDPNCLRRRPSDENNISPAEVSQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEP
RFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQQLKQECLENPDYILLTATAKVKP
HKLAFGGFGRKKKQEDNEEYVCPMDVEMPKGRSFQKGYRGMELQIYDDDLDRFDQMDDSE
GTVRQIGAFSEGINNLTSMLKEDEFFKEISTPFSNASLKDDDSNV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagccgccttggagcaaatggatggtatcata
gcaggctccaaggctctggactactccaatggcatctttgattgtcagtccccaacatcg
cccttcatgggcagcttgcgagccctgaacttactggaggacctgaggggtgttctggag
ctcatggacactgaggagagagagggcttgcgttgtcagatcccagactctaccgcagac
agtctgttggagtggctgcatggtcacctgtcaaatggacacatttcaatcaccggtgat
gtttaccaggacagacttaatcgtcttgaaagtgataaagaatcccttgtgcttcaggtg
agtgttttgactgatcaagtggaggcacagggagaaaaaataagggacctagacctgtgc
cttgatgaacaccgtgagaaactaaatgccactgaagaaatgttacaacaggaactctta
tgccgatcagcccttgagactcagaagctggagctgatggctgaggtttccaacttgaaa
ctgaagttaactgccatggagaaacatagacttgattttgatgatcgattcggagatagt
gagggtttgattttggagattaatgaactgagatatcgcatttctgagatggaaagtgaa
cggttacagtatgaaaagaaattgaaatccactaagtcgctaatggctaaactctctagc
ctgaaactcaaaatgggccagatgcagtatgagaaacagaggaaggaacaaaaaatccag
gaacttaaggaggagctggttacgttgagaaggcagcttgatgggagagatggtgatctg
aggaggctgcaggatgagacggggtccagatccccaacgcctgcaggcctagacggcaca
gagagagttttccatactgaggaaacattaaaaaagaggctcaaagagaaacatatggaa
gtacagaggatgaagaaagcaatggagtcgttgatggcggcaaatgaggagaaggatcgc
aagattgaagagttgcgacagtcactcatgcgttacaagaaagtgcaagagatggtcatg
tcagctcaggggagaaaagataaggtcaaagacggagacagtgatgagagcaatagcgac
agctccctctccatgtccaccgccctctctgtttccatggacacagagaaatctctgctc
gcttacacagaggaagttgctgtgaggggtcaaaatgaggcggctacatttgtcagtaca
ttccaagtgccatcgttcacagtatcatccccagacaaagcagacagcgattcagtactg
gaacacatgcagtcatcaagtgataaagagtgtcaggagccaacacaatcacaggagacc
ccattacatgagagtcccgaaacatcagaggtcacaaaatcagcaagccaggacaacctc
gatggaaaagcaagtgaaaagagcaaagcttttaatgagttcaacaagattacaactcta
ccacccaaatccccatgctcttcttgtactgctgaggatgacagcttcggcaccaggaag
atgagatcttcctttggacggggattcttcaagatcaagggagggaagaggactgctagt
gcccctaatttagctgagactgagagggacggcactgaccatctggatctggcaggcatg
ccgcagaggtcagctgacagtgacagcacacacactctccccatttccccggagggcaag
aaaaagtctaaaggaatcaaagcactctttggaaaactcaaaagaagtcaatcaaccaca
ttcaacctggatgataacctatcagagagtgagtttaaacggggtggagtcagagccaca
gctgggcccaggctgggctggtcacgtgacctgcagaacaccaacagcgagttggatgct
ccgtttgcacgctggtcccgggagcaggtgtgtgattggatgcaggagcagggactgggg
ttgtacgtgagtttggcaaggcagtggatctcctccggccagacgctcctgcaggcatcc
cagcaggatctggaaagagagatgggaataaaacaccctctccacaggaagaaactccag
ctggccctgcaggcactgggctcagaggaagatgacaacaagggcaaactagactaccac
tgggtgacaaggtggcttgacgatatcggcctcccgcagtacaagactcagtttgacgag
ggacgtgtggatggacggatgcttcactatatgactgtggatgacctgttatctctgaaa
gtgggcagtgttttacatcacctcagtattaagagagccatccaggtgctccggctcaac
aactatgaccccaactgtctacggcgacgaccttcagatgagaacaacataagtcctgct
gaggtctctcaatggaccaaccaccgtgtgatggagtggctgcggtccgttgacctggct
gaatatgcgcccaatctgaggggcagtggcgtacatggaggactgatggtgctggaacct
cgctttaatgtggagacgatggctctgctgctaaatattccccccaataagacactgctg
cggaggcatctggccactcactttaacctgctggtgggttctgaggcccagcaactcaaa
caggagtgtttagagaacccagactacatcttactcactgccacggctaaagtcaagccg
cacaagctggcgtttggagggtttggtaggaagaagaagcaagaggacaatgaagagtat
gtctgtcccatggatgtggagatgcccaaaggacgcagcttccagaagggctacagaggc
atggagctccagatctatgatgatgacctagatcgatttgaccagatggatgactctgag
gggacagtaaggcagatcggcgctttctctgagggcatcaacaacttaacgagtatgctg
aaggaggatgaattcttcaaggagatctccacgccattttccaatgccagcttaaaggat
gatgactccaacgtgtga
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