Rhinichthys klamathensis goyatoka (western speckled dace): 130094840
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Entry
130094840 CDS
T09701
Symbol
si:ch211-1e14.1
Name
(RefSeq) UPF0606 protein KIAA1549 isoform X1
KO
K28284
UPF0606 protein KIAA1549
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130094840 (si:ch211-1e14.1)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130094840 (si:ch211-1e14.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1549
Amnionless
Orf78
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
130094840
NCBI-ProteinID:
XP_056117297
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MMEEGSRVTACVLLLMFVSMVTADSPAAVWPLEAPNMPNESSMEVLHNASSIPLSGFSLS
PSSDPSTATENYNHNFNTESVFTYSLNSATIPEPLATPLLLSLNSGEAVGSTHRGSSRQP
RQLNSPVPTSHNVPLSWSAISPAPQISQGTDSSVPSSLPLVGQNSPSRIPDENPIPSPRT
QNGTVGASDTNVPFGHQLEPSSRIKDLQLQASHDPNTEPGNQQLEPSHVVFIHTITSVSV
EQTMGPPEDFFPTYTMDVDYGSGDYLETMSFMGSEGNDYSLVTNLPSDVYDFEDSNSEIY
DTTFPTRVGISFSSKHLYPSSTSVSSSFSSKLVESSSFNSNSTSDGANTDLTKQITNFQS
FTNVVPFTMSRPPVFTSVLTSALDHTISLSLLTIQPTRVHSLPIVPTTSDVLNQNQSVNE
SSELASDWAGTVAVQPTDVLLPDMNSLEYYTIQLTKDNGSLPEHTVNQTVSSVFSFMPVG
TTNIVSTRTYTIDPSYMLTALFDEDLQPAGNGSWTEESSTDISGFEPFNTTNLDTSEVTP
SLTDTTVPYLEPSFTLTPSIDPSAPFGDINSTTDWATTPFIAYNTSLLVTDPSPVTKEPD
GMSSVNDSQWIITSLPTETLFTSSVLPTVLVTTSISVYELPTDSTLNVTSSPPATEMADE
GFVSGTPSDTMATDGDNTTPISSLTTTSSPVLHNDTTVTSFTITSSSNTTGTTVKDTSGT
NLTTTHPTTIARNYLCNITKPDTYLIRVGFPPGSTVGYAKAKVREILKAEYSRSVELQVV
KAPPDFVFRAVSGAVVYTAISVINALRISARTTSSFISVSPISPVPGLQYHVHTVLQFVP
SHIDVRMCTFSEQTEKGLITALAEVRRRSQESTNFTVNILNITLSPVGMAAQLQKVPVEI
TFAVRDMRGYVPGTEVSALLRQLSMVEYSYYLGFPVRQIAEPFHYPELNTTQLLRSSWVR
TVLLGVLDQRVSDKIFHATIERRLALLLGDALGTGRRFKRATSVGNNSVQIVQTTRLVGP
DNPLEIIYFVEGANGQRLPAATTANTLNSLDVQHAAIIMGYRIQGILAQPVEKQASPSSD
TEKTNTWIIVGVVVPVVVVVIIITILYWKLCRTDKLEFQPDTMSTIQQRQKLQAPSVKGF
DFAKLHMGQHSKDDLMVIQDPLPLPVSAKEQSPAENAEVPTPKSKASTKASRNGQRRRGQ
ISPSEGDSIDSDPPSERGSPEDGTRPAGLPADPKQPRKAAVNGLNGPPPTNGMDEPLSSA
SIFEHVDRLSRPIDGPKRLHNKIQLIAMQPMPALPLPSPTANDRAAENTKLNKEIQVALR
HKSEIEHHRNKIRLRAKRKGHYDFPAMDDLIDGLGDPKEQDRIYLKAQMQIDKILDPDIP
MPSLYTEPKKGNRGKRSPKQRRKQQMNGDLTDADRDRLITTDSDGTYRKYPGVNNIAYVS
DPDQGPEHHSPSPTDDVFHGPVSPPPGHPPPPPPYLPPQPSIEEARQQMHSLLDDAFALV
SPSSQGSTAGITLPGVGLSPGPPPPLSPPSRGPRPWGPGYLPLNPYTGRYAELGLPPSSV
QGLLHRQGLGPGYIPSGEALPVEQLQPESLYTGRGGLALTDDLPSSARPRPVGGTTGAQL
HHLTHAGLTGRVGDCRQPGGLNWSPYHEDDSKFANNREPVLGSLDYSSISLFQTSRNGLK
EPSSTSAHLDSLGLGYAPSAPLEEPSPPNHSSASLIKAIREELMRLSQKQAAVPSYHS
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaaggtagtcgggtcaccgcgtgcgtgctgctgctgatgttcgtctccatg
gtgaccgctgattcacctgctgcagtctggcctttggaggctccaaacatgccaaatgaa
tcttcgatggaagtgctgcataatgcatcatccatccccttgtctggattttctctttca
cctagttcggatccatccacagccaccgagaattacaatcacaatttcaacactgaatca
gtattcacttactccttgaactctgccacaatcccagagcctcttgccacacctctttta
ctttccttaaactctggagaggcagttggatctacccacagaggttcctccagacagcct
cgacaactaaattctccagtgcctacatcccataatgtgcccttatcttggtctgctatc
agcccagctccccaaatctcacagggtacagattcatctgtgccttctagcttgccttta
gttggacaaaattctccttcgagaattcctgatgaaaatcccattccttcccctcgaaca
cagaatgggacggtgggagccagtgacactaatgtaccttttggacaccaattggaacca
tccagcagaatcaaagaccttcagttacaagccagccatgacccaaacaccgaaccaggc
aatcagcagttggagccaagtcatgtggttttcatacatacaataacttcagtgtctgtc
gagcaaactatgggtccacctgaagactttttcccaacctacactatggatgtggactat
ggttctggagattacctagaaacaatgtccttcatgggatctgaaggtaacgactattcg
ctggttaccaatctcccatctgatgtgtatgactttgaggactcaaactccgagatctat
gacactacgtttcccacaagagtggggatttcattttccagcaaacacttgtatccctcc
tctaccagtgtttctagttctttctccagcaaacttgttgaaagttccagttttaatagc
aattcaacctcagatggagccaacactgacttaaccaaacaaataacaaactttcagagt
tttacaaatgttgtgccctttaccatgtcaaggcctccagtttttaccagtgttttgaca
tcggcccttgaccacaccatttctctatcacttttaaccatccaaccaaccagagtccat
tctctaccaattgtcccaacaacttcagatgtcttaaaccagaaccagtctgtcaacgag
agctcagagttggcatctgactgggcaggcactgttgccgtccaacccactgatgtcctt
ttaccagacatgaacagtttagaatactacaccatccagttgaccaaggacaatggtagc
ttgccagagcacactgtcaatcagacggtctctagtgttttctctttcatgccggttggc
accacaaatattgtgagcactagaacctacaccattgacccaagttacatgctaacagct
ttgtttgatgaagatctacagcctgcaggtaacggttcctggactgaggaatcatcaaca
gacatctctggatttgagccttttaacactactaacctggatacctctgaagttacacct
agtctaacggatactacagtgccatatttggagccgtcatttacactgacaccctcaata
gacccttcagctccctttggagatataaactcaaccactgattgggctaccacacctttt
atagcatacaacacttccttactggtgactgacccatctccggtgaccaaagaaccggat
ggcatgtcttctgttaatgacagccaatggattatcacctcactcccaacagagaccctc
tttactagtagtgtacttcccactgttttagtaaccacctctatcagtgtttatgaatta
ccaactgactcaaccttaaacgtcacctcctcccctcctgcaaccgagatggctgacgaa
ggatttgtgtctggaacaccatctgacaccatggctactgatggcgataacaccacaccg
atcagtagtcttacaaccacgtcctctccagtattacataatgacaccactgtcacgtct
tttactatcacaagctccagcaacacaacagggactactgtgaaagacacatcaggtaca
aacctaaccacaacccatccaacaactattgcccggaattatctctgcaacatcactaaa
ccggacacctacttgatcagagttgggtttcctccggggtctactgttggatatgctaaa
gccaaagtccgagagattctcaaagccgagtacagccgctcagtggagctacaggttgtg
aaagctcctccagattttgtgtttcgtgctgtgtctggtgcagtggtttacactgccata
tcggtcattaatgccctgagaatctctgctcggaccactagctcctttatcagcgtgtca
ccgatcagtcctgttccaggcctgcagtaccatgtacatacagtacttcagtttgtaccc
agccacatagatgtgcgtatgtgtaccttcagtgagcagacagagaagggtctgatcaca
gccttagctgaagtacgccgacgctcacaggagtccacaaactttactgtgaatatttta
aacatcacactgagtcctgtgggcatggcggcacaactgcagaaggttccagttgagatc
acctttgctgtgcgtgatatgcgcgggtatgtgccagggacagaggtgagcgctctgctt
cgacaacttagcatggtcgagtacagctactatctgggcttccctgtgcgccagattgca
gaaccattccattacccagagctaaacacaacccaacttctgcgttcttcatgggttaga
acagtgttgttgggagtattggaccagcgtgtgagtgacaagatcttccatgctactatt
gagaggagactggctctgttgctgggcgatgcattaggtacagggcgtcgctttaagaga
gcaactagtgtggggaacaacagtgtgcagattgtacagaccactcgtcttgtgggccct
gacaaccctctggagattatctactttgtggaaggagctaacggacagaggcttcccgcc
gcaaccacagcgaacacgctcaacagtcttgacgtacagcatgcagcgatcatcatgggc
taccgcatccagggaatattagcacagcctgtggagaaacaggcctctccttcctcagac
acagagaagaccaacacgtggataatcgtaggggtggtagttcccgtggtggtggtcgtc
attataataactatcctgtactggaaactctgccgcactgacaaactggaattccagcca
gacaccatgagcaccatccagcaaagacagaagctgcaggcacccagcgtgaagggtttt
gactttgccaagctgcacatgggccagcacagtaaggatgatctcatggtcatccaggac
ccgttgccgcttcctgtatccgctaaggagcaaagcccagctgagaatgcagaggtgccc
acaccaaagtccaaagcctccaccaaagcttctcgtaatggccagcggcgcaggggccag
atttctccatcagagggcgactctatagacagtgatccacccagcgagagaggatcacct
gaggacggcacgagacctgctggtctgcctgccgatccaaagcaaccacgtaaagcagct
gttaatggattaaacggtccacccccaacgaatggcatggatgagccattatcttcagct
tccatttttgagcatgtggaccgattgtcccgcccaattgacggccctaaacgcctccat
aataaaatccagctcatcgccatgcagccgatgccagcgctgcccctgcccagcccaacc
gccaatgacagagctgcagagaacaccaagctgaataaagagatccaggtagctttacgg
cacaagtctgagatcgagcaccatcgcaataagatccgcctgagggccaaaaggaaaggc
cattacgacttccctgctatggatgatctcattgatggtcttggcgaccccaaagagcag
gaccgaatttacctgaaggcccagatgcagattgacaagatactcgatccagatattccc
atgccctctctgtacaccgagcccaagaaaggcaaccgagggaagcgttctcctaaacag
agaaggaaacagcagatgaacggtgatctgacagatgctgaccgagatagactcataacg
actgacagcgatgggacatacaggaaataccctggagtcaataacatagcatatgtgtcg
gacccagaccaggggcccgagcatcatagcccctccccgacggatgacgtgttccatggt
cccgtttctcctcctcctggtcaccctcctcctccacccccctatctgccgcctcagccg
tctatagaggaggcccggcagcaaatgcactctctactggacgatgccttcgccctcgtg
tctccttcgtctcagggcagcacagctggcatcactctgcctggggtcggtctcagcccc
ggacccccgcctcctttgagcccgccatcccgtggtcctcggccctggggcccaggatac
ctgcctttgaatccctacacagggagatatgctgaattaggtctgcctccttccagtgtg
caaggtttactacatagacagggattggggcccggctacatcccttcaggagaagccctt
cctgttgaacagctacagccggagtcgctttacactggtcgaggtggactcgcgcttaca
gatgatctgccctcctccgccaggccacgacctgtaggtggcactacaggtgcccagcta
catcatttaacccacgctggtctgacgggtcgtgtaggggactgccggcagcctggtggg
ttaaactggagcccgtatcatgaggacgacagcaaattcgctaacaacagagagcctgtt
cttggctctcttgactacagctccatctctttattccagacctccaggaatggcctgaaa
gagccatcttccacttctgcccacctggactctctcggcctgggctacgctccctccgct
cccctagaggagccttcccctcccaaccactcgtccgcctccctcatcaaagcaatccga
gaggaactgatgcgcctctcccagaaacaggcagcggtacccagctaccacagctga
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integrated database retrieval system
