Rhinichthys klamathensis goyatoka (western speckled dace): 130094951
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Entry
130094951 CDS
T09701
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130094951 (sbno1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130094951 (sbno1)
BRITE hierarchy
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130094951
NCBI-ProteinID:
XP_056117536
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDVDPQDTLPLPASQQSVSLNALDIGLSNETSGIVRIE
PAVPPTPTVTIREKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTGSRQTITVTKVVHTS
STAQQRSLSSSTVGAPNNDQIRLKDLLRTSSLKTSSLGELMKLKPPPDIAQPVATATATG
TKIILVSTKMMSRSAELNNGLKKEVSSKDVARIWVNDDMKMRSFSPVNKLPGMKEEDEPE
EEEEEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPDVWYRLSITEETIDRGW
LSALQLEAITYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWF
SVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQ
SGGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKA
RVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMKLRG
MYIARQLSFTGVTFKIEEVPLTQSYIKMYNKSVRLWVSAREKFQQAANLMDAEQRMKKSM
WGQFWSAHQRFFKYLCIASKVRRVVQLAREDVKNGKCVVIGLQSTGEARTLEALEEGGGE
LNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSVKKKPSPSETTTEQKGKKRKGPE
TKKQVKKARKSGGLSGSSSDESNSDDSDKDAESDDSFKSVSSGEEDEDDFNPFKDDSSED
EEDDPWLIRKDSKKSKEKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTTPTIKPSNNTV
AVAKSEPEESSCVTSQDAVEDAQRMKRDLLDRLEQLAEDLPPNTLDELIDELGGPENVAE
MTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGDKNIAIISEAASSGISLQ
ADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIV
AKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVSLDSPLVSPPGDFNG
DFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTL
SAVIQNAKKTGRYDMGILDLGSGDEKVKKVDAKKFLTPGYSTSGHVELYTVSVERGMAWE
DATHVWADQNGPDDGFYVQVRNNKKIAILIKEVNPRKRLFMVYRPNIGKQVKLETYADLK
KRSKKVLSDDAKQHWIDQYNGSADVCSHAYWRGNCKKVSVGLQCEIGLRCRTYYVLCGSV
LSVWTKVEGVLASVSGSNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINILSSSDQSQQL
AVQQQQMWQQLHPQSISHTVNT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaagatttgcttctcgctgctctaagtgaaagtggaatctgccctaat
gatctgtttgatgttgatcctcaggacacacttccactccctgcttcacaacagtcagtc
tcattaaatgcacttgacatcggtctcagtaatgaaacttctggaattgtcaggattgaa
cctgcagttccacctactcctacagtcacaatcagggagaagccccagccctcaactact
accttcgttttaaatcaactgaatcagttgccatcgctgggtaccattgtagtcaccaaa
ccatcagccgggaccggctccaggcagaccatcacagtaaccaaggtggtacacacaagt
tcgacagcacaacagaggtctttatcatcttcaactgtgggtgctccgaataatgaccag
atcaggttgaaggacctcctcagaaccagcagcctgaagacaagcagccttggagagctt
atgaagttgaagcccccacctgacatagcgcagcccgttgctacggcaacagccacaggc
acaaaaattattctggtctccacaaagatgatgagcagatcagcggaattaaacaatggg
ttgaaaaaagaagtgtccagcaaagatgtagcaagaatctgggtcaacgatgacatgaaa
atgcggagcttctcacctgttaataaattaccaggaatgaaggaggaagatgaaccagaa
gaagaggaagaggaggagctgggtcatgcggagacatacgccgaatacatgccaatgaaa
ctgagaattggactgcggcaccctgatcctgtggtggagaccagctctctgtccagtgtc
aacccgccagatgtgtggtacagactttcaattacagaggagaccattgatagaggctgg
ttatctgccctccagctagaggccatcacatatgctgctcagcaacatgagacattccta
ccaaatggagacagagcagcctacttgattggagatggagccggtgttggaaagggtaga
accattgctggaatcatatatgaaaattatcttcttggcaggaaaaggtccctctggttt
agtgtctcaaatgacttgaaatatgatgcagagagggacttgagagacatcggagcaaag
aacattcaggtccattcgctaaacaagttcaaatatggtaagatttcatcaaagcacaat
gggagtgtgaaaaaaggtgtgatctttgccacatactcttccctgattggagagagccag
tctggaggaaagtacaagacaagattcaaacagttactacactggtgtggagatgacttt
gatggtgttatcgtctttgatgagtgtcacaaagccaaaaatgtttgtcctattgggtca
tccaagcccacaaagaccgggttggcggttttagagctacagaacaagctgccaaaagcc
cgggttgtgtacgcaagtgctacaggagcatccgagccccgcaatatggcctacatgaat
cgccttgggatctggggagaaggaactccatttaaggaatttactaattttatccaagct
gttgagagaagaggtgtcggtgccatggagattgttgccatggatatgaagctgagagga
atgtacattgctcgacagctgagcttcacaggcgtgacgtttaaaattgaagaagttcct
ttgacgcagagctacatcaagatgtacaacaaatcagtccgcttgtgggtcagcgcaaga
gagaaattccagcaagccgccaacctaatggatgcagaacaacggatgaaaaagtcgatg
tggggtcagttctggtcagctcatcagaggttcttcaagtacctgtgcattgcttctaag
gttcgaagagtggtgcagctggcccgagaggacgttaaaaatggaaagtgtgtggtgatt
ggtcttcaatcaactggagaagctcgaacccttgaggccttggaggagggaggaggcgag
ctcaatgactttgtctccactgcaaagggtgtcctgcagtccttggtggagaagcatttt
cctgcaccagacagacaaaaactcttcagccttttaggcatcgatctgagtgtgaagaaa
aaaccttcaccttcagaaaccaccactgagcagaaaggcaaaaagcggaaagggccagaa
acaaagaagcaagtgaaaaaggctcgtaaatctggtggtctgtctggttccagctcagac
gagagcaactcggacgattcggacaaagatgcagaaagcgacgacagcttcaaatcggtc
agctcaggggaggaggatgaagatgacttcaacccctttaaggatgattccagtgaggat
gaggaagatgatccgtggctcatcaggaaagactctaaaaagagtaaagaaaagaggaac
aagaagaagaaaaaaagcattgatcctgactctattcaaagtgccttgttagcctccggg
cttggaacaaccagacccacttttacaacccccaccatcaaaccttcaaacaacacggtt
gctgtagccaaaagtgagccagaggagagcagctgtgtgaccagtcaggatgctgttgag
gacgcccagcgcatgaagagggacctgctggatcgactggagcagctggcagaggatcta
ccacccaacacgctcgacgaactcatcgatgagctgggaggccctgaaaacgttgcagag
atgactggccgcaaaggcagagtagtcagcaatgatgatggcagcatttcctacgagtct
cgatcagaacttgacgtcccagttgaaatcctaaacctcacggagaagcagaggttcatg
gatggagataagaacatcgcaattatctcagaggctgccagctctggcatttctcttcaa
gccgaccgcagagtgaagaatcagaggaggagggtacacatgacattagagctaccctgg
agtgctgacagagctattcagcagtttggtcgaactcacagatccaaccaggtcacagca
cctgagtatgtgttcctcatctctgaactcgctggagagcaacgattcgcctctattgtt
gccaaacgactggagagcctgggtgctttaacacacggagacagaagggccacagagacg
agagatctcagccgatttaactttgacaacaaatatggcagaaacgctctggaaatagtc
atgaagtctattgtcagtctggattctcctttagtgtctccacccggtgacttcaatggg
gatttcttcaaagaaatccgcaatggtttaatcggagtggggctgataaatgtggaggat
agatctggtgttctctccctagacaaagactacaacaacattgggaagttcctgaacagg
attcttggtatggaggtccagcagcaaaatgcactctttcagtatttctctgacactttg
agcgctgtcattcagaatgccaaaaagactggaagatatgacatgggaattttagatttg
ggctctggagatgaaaaagtaaagaaagttgatgcaaagaaattcttgacaccaggatat
tccacctcagggcatgtggagctctatacagtgagtgtggagcgaggaatggcatgggag
gatgccacccatgtctgggctgaccagaacggaccggatgatggtttttacgtccaggtg
cggaataacaagaaaattgccatccttataaaggaagtcaatcccagaaagagactgttt
atggtgtacagaccaaatatcggaaaacaagttaaactggagacttacgctgacctcaag
aagagaagtaaaaaggtcctctctgatgatgccaagcagcactggattgatcagtacaac
ggctctgccgatgtctgctcgcacgcgtactggcgagggaactgtaagaaggtgtcagtg
gggctacagtgtgagatcgggctgcggtgcaggacatactacgtcctctgtggctccgtt
ctcagcgtgtggactaaagtggagggagttctggcctcagtcagcggatccaatgtgaag
atgcagattgtacgtttgagaacagaggatgggcagagaattgtgggtctgatcattccc
gccaactgcgtgtcgcccctgatcaacatcctgtcatcatcagatcagtctcagcaactg
gcggtgcagcagcagcaaatgtggcagcaactgcatccgcagagcatcagccacaccgtc
aacacatag
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