Rhinichthys klamathensis goyatoka (western speckled dace): 130095018
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Entry
130095018 CDS
T09701
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
rkg04517
IgSF CAM signaling
rkg04530
Tight junction
rkg04810
Regulation of actin cytoskeleton
rkg05100
Bacterial invasion of epithelial cells
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130095018 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130095018 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
130095018 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130095018 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130095018 (arpc1b)
05100 Bacterial invasion of epithelial cells
130095018 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130095018 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130095018 (arpc1b)
Membrane trafficking [BR:
rkg04131
]
Others
Actin-binding proteins
Arp2/3 complex
130095018 (arpc1b)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
130095018 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
PEP5_VPS11_N
eIF2A
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
130095018
NCBI-ProteinID:
XP_056117630
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGSNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVTWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTAWGSKMPFGEVMFESTGTAGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCASL
SSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNKAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKASVDSKEAVLESVHKNSISQISILNGGKAKCAKFCTTGMDGGMAIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcacagttttcttcttgaacctatcagctgccatgcctggaacaaggaccga
actcaaatagcactgtgtcctaataaccacgaagtccatatctacaagaaggatggaagc
aactggaacaaaatccatgtgttgaaggagcacaatggccaggttactggcattgactgg
gcccctgagagcaatcgcatcgtcacctgtggcaccgaccgtaacgcatacgtctggacc
ctaaagggagacgtatggaagcccaccctggtcattctcaggatcaaccgtgctgcccgc
tgtgtgacatggtctcctaaagaaaacaagtttgctgtgggaagtggctcacgtctgatc
tcagtgtgctattttgagcaggaaaatgactggtgggtgtgcaagcacattaagaagccc
atccgctccaccatcctttgtttggactggcaccccaataacgtccttttggcagctgga
tcatgtgactttaaatgcaggatcttctctgcttacataaaggaagtagaagagaagcct
gctccaacagcatggggctctaaaatgccatttggagaggtcatgttcgaatctactggt
actgcaggttgggtgcatggcgtctgcttctcggacagcgggaatcgcgtggcctgggcc
agccatgacagcactgtggcagtggccgagggaggaaagactgctgtctgcgccagtcta
tcttctgaaaccttgcctcttctgtgcgtgactttcattactgagaacagcctagtggcc
gctggccacgactgctaccctgtgttgtttgtctacgattcaaacaaagcagccctgtct
ttcggaggaaaacttgacgtgcccaaacagagtgctcagaagggcatgacagccagggaa
cgcttccagaacttggataagaaagcctctgtggacagcaaggaagcagtccttgagtct
gtgcacaagaacagcatcagccaaatctcaatccttaatgggggaaaagccaagtgtgcc
aaattctgcaccactggtatggatggaggcatggctatttgggatgtaaagacccttgaa
tctgcaatgaaagatctcaagattgtctag
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integrated database retrieval system
