Rhinichthys klamathensis goyatoka (western speckled dace): 130095159
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Entry
130095159 CDS
T09701
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130095159 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130095159 (lrit3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_1
Ig_2
Ig_VEGFR-1-like_5th
ig
LRR_5
LRR_14
V-set
C2-set_2
LRR_9
Beta_helix_2
Motif
Other DBs
NCBI-GeneID:
130095159
NCBI-ProteinID:
XP_056117823
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MYRLLVAQVLLCCWSVAQPFCPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLDTV
KLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDAGCFYNLKVLHELRLDGNMIAIF
PWESLKEMPSLRTLDLHNNRLTNVPVEAAPYLVNITYLDISSNKLTTLPSDLVDIWPPFS
GILPSANASQKIVLGLQDNPWYCDCRISKLIELSKMSSIPVALMDQFLTCSGPENLAGVL
FQRAELDQCLKPSVMISATKITASLGSNVILRCDANGFPTPTLLWTRADGSAFNNTVVQQ
SPGEGVHWSILSLHSIVFKDAGDYLCKAKNVAGKAEASITLSVDGMQATTQSPPISITKL
PDGQPVTYFVGTRTPLYTSLSPTLTTRAAMTTMPPLPTRKSLRPGEGVQRSPPAGDKPAM
VQQSKGDKGLMMSDKFKKKADIKDIEVVEETSDTAVLLWTAEGFPSNAPLTVVYFPYDAK
EDKESVDTEVGQGKLLLEYLMPNLLYTVCLVTKGSVSGKEQCVDFSTLDNGDDDGQNKVL
MIASGIACAVAVPLILVLLYKILCLYCKGNSSRNSGPDEDLSKETYVKFETLTMKQRTLN
GQANDLWARRQTQDSERMLLCSRSSIDSQMTYKSDSSRSEYLC
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtctgctggtggcccaggttctcctgtgctgctggagtgttgcacaacccttc
tgtccgtcgcagtgcacctgcgtgtaccacggacgcagcgatggcactggcagcaggtct
gttttatgcaatgaccctgacatgtcagatattccagtcaacgtccccttggacacggtg
aagctgcgggtggagaagacagctgtgcgtcgagtgcccactgaggccttctactacctg
tcagagttgcgttacttgtggataacgtacaattcaatcacctctgtggatgctggctgt
ttctacaatctgaaagttcttcatgagctacgactggatgggaacatgattgctatcttt
ccctgggagtctctgaaagagatgccaagtctgaggaccttggacctgcacaacaaccgc
ttgactaatgttcctgtggaggcagcaccttacctggttaacatcacctacctagatatt
tcaagtaacaagctaactaccctcccctctgacttggtggacatctggcctccattttca
ggcatcctgcctagtgccaatgcctcacaaaagattgttctaggtctgcaggacaatccc
tggtactgtgactgtcgaatttccaagctcattgagttgtctaagatgagcagcatacct
gtggcgttgatggatcagtttctaacatgcagtggaccagagaacttagctggtgtcctg
ttccagcgggctgaactggatcagtgcctcaagccatcagttatgatttcagccactaag
atcacggcatcactaggcagcaatgtgattctgcggtgtgacgccaatggtttccctacc
cccacccttctctggactagagctgatggatctgcattcaacaacacagttgtgcagcaa
tctccaggtgagggggttcattggtccatcctcagtttgcacagtatcgtgtttaaggat
gcaggcgattacctctgcaaggccaagaatgtcgcagggaaggccgaggcatccatcacc
ctgtctgtggatgggatgcaggccacaacgcagtccccaccgataagcataaccaagctg
cccgatggtcaacccgtgacttattttgtagggactaggacgccattgtatacttcctta
agtcccacacttacaaccagagctgccatgaccacaatgccaccgctgccaaccaggaag
agtctgagaccaggcgaaggagttcagaggtccccgcctgctggagacaaaccagctatg
gtccagcaaagcaaaggcgacaaaggtttaatgatgagtgacaagttcaaaaagaaagct
gacatcaaagacattgaggtagtggaggagacaagtgacacggcggtcttattatggacc
gctgaaggttttccaagcaatgcgcccctaacagtggtctactttccatatgatgcgaaa
gaggataaggagtcggtcgatacggaagttggtcaagggaagctgctcttggagtatctg
atgcctaacctgctctacacggtgtgtttggttactaagggttcggtgtctgggaaagag
caatgtgtggatttcagtactctggataacggtgatgacgatgggcagaacaaagtcctg
atgatcgccagcgggatcgcatgcgcagttgcggtgcctctcattttggtgttgctctac
aagatcttgtgtctgtactgtaaaggaaacagtagcaggaacagtggaccagatgaagac
ctttcaaaagagacgtacgttaagttcgagacgctcaccatgaaacaaaggactctgaac
gggcaggcgaatgatttgtgggcacgaaggcagactcaggattcagagaggatgctcctg
tgctcacgttcaagcattgactctcagatgacgtacaagagtgacagctctagatccgag
tacctgtgctaa
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