Rhinichthys klamathensis goyatoka (western speckled dace): 130095167
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Entry
130095167 CDS
T09701
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130095167 (rnf130)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130095167 (rnf130)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130095167 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
PspB
DUF2254
Motif
Other DBs
NCBI-GeneID:
130095167
NCBI-ProteinID:
XP_056117837
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MLKRLAAPASCSSCLLAFLLAFVSPRCTQSIGADKTMVNKEDYYSATVNATVLDHKGNPQ
HLVTKNDGRYGQNSPKTEAKGIVIAPAAVNGAVDLQGCCPHTRFVVPPKTTHWVAIMQRG
KCTFKEKILKAVAFNASAVIIYNNSTKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEK
NQTVLVSVMVGSRGLPKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQ
RRLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCV
DPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMAFDMDRMSRSQTSSQRTALVDLSSETS
ISLEPLHHSSSSQLPSDEELIPRSGEINIAVTSGHFFNRNSVSPRSVDYEMELPDIQASL
DMYDTNNKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagattggccgcgccggcgtcatgcagcagctgccttctcgccttcctcctt
gccttcgtctcgcccaggtgtacgcagtctatcggtgccgacaaaactatggtgaacaag
gaggattattatagcgccacagtcaacgccaccgttttggaccataaaggcaatcctcaa
catttagtgacgaagaatgacgggcggtacgggcagaattctcctaaaacagaggcgaag
gggattgtgatcgcacctgctgctgtcaatggggcggtggatttgcaaggctgctgtccg
cacacccggtttgtagtgcctccgaagaccacacactgggtggccattatgcagagaggg
aagtgcaccttcaaggagaagatccttaaggcagtggctttcaatgcctcggccgtcatt
atctacaataacagcaccaaagaggacaccgtcacaatggctcatgaaggcactggagac
atagtggcagtgatgattactgagtcctttggaaaggaaattctgggattcctggagaag
aaccagactgtgctggtctccgtgatggtggggtcacgagggctgcctaaaaacatcaac
cgcggctccttggtgttcgtctccatctccttcattgtactgatgattatctcgtctgct
tggctaatattctacttcatccagaagatcagagacaccagcgcaagggaccgcagtcag
cgacggctgggagatgctgccaagaaggccattagcaagctgactaccaggacagtaaaa
agaggggacaaggaaacagaaccagattttaatcattgtgcggtgtgcatcgaaggttat
cagctaaacgatgtggtccgcatcctaccttgcaagcatgtcttccataaaatgtgtgtg
gatccatggctaaatgagcactgcacctgtcccatgtgtaaactcaacatccttaaagct
ctgggggttatgcccaacctgccctgcgtggacaacatggcttttgacatggaccgaatg
tcccgcagtcagacttccagccagaggacggcgctggtggacctgtcctctgagaccagc
atcagcctggagcctctacaccactccagttcctcccagcttccctccgacgaagagctc
attcctcgctccggagagatcaacatcgctgtcactagtggtcatttcttcaaccgtaat
tctgtgtctccgcgcagtgtagattatgaaatggagcttccagacatccaggcatcactg
gacatgtacgacaccaacaacaaatcctga
DBGET
integrated database retrieval system
